G1813123


Basic Information

Item Value
gene id G1813123
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43358434 ~ 43359555 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074235
GAACAGTGCCAGATGGTGTTCTATTCAGCTGGAATGGAGCATGGTGTGATTTTCACACACCACCCCTGAAAGCTGAGAGTGTGTGAGCGCAAGGTGCTCCAGTCACCTTAGTTACTAaccagagagtgagtgagagtgggagagtgagagcgaaacagagagtgagagaaagtgagagtgagggagagaaacagagagaaacagagtgagagagagaaacagagagagagagagagagagagaaacagagagtgagggagaaagagagtgagagaaacagagaaaaagagagagtgagagagagaaacaaagaaaaatggagtgagagagaaagagtgtgagagagattgacagagaaacagagagagaaacagaaagaaacaaaagagagagagagagataaacagagagagaaacagcgagaaacagagaaagagagattgaaaaacagagagagagaaacagcgagagaaacagcaagaaacagagagagaaacagcgagaaacagagaaagagagattgaaaaacagagagagagagaaacagcgagagaaacagcgagaaacagagagaaacagagaaagagagattgaaaaacagagagagagagaaacagaaagaaacaaagagagagaaacagcgagaaacagagagagaaagtgagaaacagagaaagagagagagagaaacagagagagagaaacagaaagaaacaaagagagagaaacagcgaaaaacagagagagaaagtgagaaacagagaaagagagagagagaaacagagaaagagagaaacaaaagggTGACTGTTTCTTCCACTGCTACTGATTACCCAGCAGTCTCTCTGTCCTTGCTTAGATTATTGACAACATTGCTGCAAACTTTGGCGAAATGGCAAATCAAAGCCCCGCTCTGCCAGATGACTTTGTCATGCAAAGTAACAAGGTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074235 True 952 lncRNA 0.43 4 43358434 43359555

Neighbor

gene id symbol gene type direction distance location
LOC110501904 LOC106582430 coding upstream 126301 43230424 ~ 43232133 (+)
LOC110501905 LOC106582444 coding upstream 132041 43213840 ~ 43226393 (+)
LOC110501901 LOC106582440 coding upstream 320440 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 623872 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 673326 42615178 ~ 42685108 (+)
LOC110501907 LOC106582447 coding downstream 142238 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 190917 43550472 ~ 43572947 (+)
LOC118943639 LOC106582449 coding downstream 266886 43626441 ~ 43627892 (+)
LOC110502162 LOC106582482 coding downstream 281757 43641312 ~ 43643916 (+)
LOC118943641 LOC106582431 coding downstream 491054 43850609 ~ 43853026 (+)
G1813071 NA non-coding upstream 67328 43284273 ~ 43291106 (+)
G1813017 NA non-coding upstream 147671 43210127 ~ 43210763 (+)
G1813008 NA non-coding upstream 157133 43201047 ~ 43201301 (+)
G1812930 NA non-coding upstream 222881 43135337 ~ 43135553 (+)
G1812915 NA non-coding upstream 236200 43122006 ~ 43122234 (+)
G1813094 NA non-coding downstream 26406 43385961 ~ 43389375 (+)
G1813143 NA non-coding downstream 43128 43402683 ~ 43402885 (+)
G1813144 NA non-coding downstream 43385 43402940 ~ 43403259 (+)
G1813148 NA non-coding downstream 47549 43407104 ~ 43407319 (+)
G1813149 NA non-coding downstream 48403 43407958 ~ 43408439 (+)
G1812953 NA other upstream 208050 43149762 ~ 43150384 (+)
G1812428 NA other upstream 634320 42723672 ~ 42724114 (+)
LOC110501889 LOC106582433 other upstream 969147 42256417 ~ 42389468 (+)
G1810740 NA other upstream 1892085 41464478 ~ 41466349 (+)
G1813442 NA other downstream 748689 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 958603 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 1003106 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1138902 44498457 ~ 44508051 (+)
LOC110501918 LOC106582467 other downstream 1207333 44566863 ~ 44573921 (+)

Expression


Co-expression Network