G1813171


Basic Information

Item Value
gene id G1813171
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43435720 ~ 43487927 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074289
ggttactacatgattccatatgtgttttttcatagttttgatgtcttcactattattcaacaatgtagaaaatagtcaaatgtagacctccacaagtctggttcatccttgggagcaatttcccaacgcctgaaggtaccacgttcaaccACACAGCCACACTGTAAGAAATTATTCTGGGGTGtactgaaattcccccaaaaaaaatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074289 True 209 lncRNA 0.39 2 43435720 43487927

Neighbor

gene id symbol gene type direction distance location
LOC110501904 LOC106582430 coding upstream 203587 43230424 ~ 43232133 (+)
LOC110501905 LOC106582444 coding upstream 209327 43213840 ~ 43226393 (+)
LOC110501901 LOC106582440 coding upstream 397726 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 701158 42688215 ~ 42735867 (+)
LOC110502156 ahr2a coding upstream 750612 42615178 ~ 42685108 (+)
LOC110501907 LOC106582447 coding downstream 13866 43501793 ~ 43549935 (+)
LOC110501909 LOC106582448 coding downstream 62545 43550472 ~ 43572947 (+)
LOC118943639 LOC106582449 coding downstream 138514 43626441 ~ 43627892 (+)
LOC110502162 LOC106582482 coding downstream 153385 43641312 ~ 43643916 (+)
LOC118943641 LOC106582431 coding downstream 362682 43850609 ~ 43853026 (+)
G1813163 NA non-coding upstream 11079 43424084 ~ 43424641 (+)
G1813149 NA non-coding upstream 27281 43407958 ~ 43408439 (+)
G1813148 NA non-coding upstream 28401 43407104 ~ 43407319 (+)
G1813144 NA non-coding upstream 32461 43402940 ~ 43403259 (+)
G1813143 NA non-coding upstream 32835 43402683 ~ 43402885 (+)
G1813219 NA non-coding downstream 11742 43499669 ~ 43499895 (+)
G1813223 NA non-coding downstream 16529 43504456 ~ 43504801 (+)
G1813225 NA non-coding downstream 20225 43508152 ~ 43508364 (+)
G1813227 NA non-coding downstream 22402 43510329 ~ 43510721 (+)
G1813239 NA non-coding downstream 41193 43529120 ~ 43529335 (+)
G1812953 NA other upstream 285336 43149762 ~ 43150384 (+)
G1812428 NA other upstream 711606 42723672 ~ 42724114 (+)
LOC110501889 LOC106582433 other upstream 1046433 42256417 ~ 42389468 (+)
G1810740 NA other upstream 1969371 41464478 ~ 41466349 (+)
G1813442 NA other downstream 620317 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 830231 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 874734 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 1010530 44498457 ~ 44508051 (+)
LOC110501918 LOC106582467 other downstream 1078961 44566863 ~ 44573921 (+)

Expression


Co-expression Network