G1813209


Basic Information

Item Value
gene id G1813209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43541196 ~ 43541322 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074328
ggtatatggccactCCACTTTGCGTCGTGTATaataacagcccttagccgtggtatattggccatatataccacacccccttgggccttattgcttaattatatcaTGAGCTTAGCTCTTTCTCTCA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074328 True 127 lncRNA 0.44 1 43541196 43541322

Neighbor

gene id symbol gene type direction distance location
LOC110501906 LOC106582445 coding upstream 54433 43346803 ~ 43486763 (+)
LOC110501904 LOC106582430 coding upstream 309063 43230424 ~ 43232133 (+)
LOC110501905 LOC106582444 coding upstream 314803 43213840 ~ 43226393 (+)
LOC110501901 LOC106582440 coding upstream 503202 42884711 ~ 43039681 (+)
LOC110502157 LOC106582435 coding upstream 806634 42688215 ~ 42735867 (+)
LOC110501909 LOC106582448 coding downstream 9150 43550472 ~ 43572947 (+)
LOC118943639 LOC106582449 coding downstream 85119 43626441 ~ 43627892 (+)
LOC110502162 LOC106582482 coding downstream 99990 43641312 ~ 43643916 (+)
LOC118943641 LOC106582431 coding downstream 309287 43850609 ~ 43853026 (+)
LOC118943642 LOC106582432 coding downstream 366337 43907659 ~ 43908820 (+)
G1813208 NA non-coding upstream 1928 43536298 ~ 43539268 (+)
G1813240 NA non-coding upstream 11139 43529722 ~ 43530057 (+)
G1813239 NA non-coding upstream 11861 43529120 ~ 43529335 (+)
G1813227 NA non-coding upstream 30475 43510329 ~ 43510721 (+)
G1813225 NA non-coding upstream 32832 43508152 ~ 43508364 (+)
LOC110501907 LOC106582447 non-coding downstream 5257 43501793 ~ 43549935 (+)
G1813258 LOC106582449 non-coding downstream 45371 43586693 ~ 43657135 (+)
G1813302 NA non-coding downstream 121873 43663195 ~ 43663683 (+)
G1813332 NA non-coding downstream 183255 43724577 ~ 43735733 (+)
G1812953 NA other upstream 390812 43149762 ~ 43150384 (+)
G1812428 NA other upstream 817082 42723672 ~ 42724114 (+)
LOC110501889 LOC106582433 other upstream 1151909 42256417 ~ 42389468 (+)
G1810740 NA other upstream 2074847 41464478 ~ 41466349 (+)
G1813442 NA other downstream 566922 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 776836 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 821339 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 957135 44498457 ~ 44508051 (+)
LOC110501918 LOC106582467 other downstream 1025566 44566863 ~ 44573921 (+)

Expression


Co-expression Network