G1813258 (LOC106582449)


Basic Information

Item Value
gene id G1813258
gene name LOC106582449
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 43586693 ~ 43657135 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2074377
ACGGGACAACCATTGTAATTACAAGGTCAACGATATTAACCCAGATTAACCCTTCAACGgtaaaacattcattcaaacacctACTGGGTACCTGTACATTTACTAAGTTTTTTATAATAGCAGCACGGTATATGATACAACAACACCAGGTAATGGATATACAACACATCattcttgttattgttattttagagTGGTACAATAAGGGATCACACACAGCAACATAGCGGTCAAT

Function

NR:

description
trace amine-associated receptor 13c-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2074377 True 235 lncRNA 0.36 2 43586693 43657135

Neighbor

gene id symbol gene type direction distance location
LOC110501909 LOC106582448 coding upstream 13746 43550472 ~ 43572947 (+)
LOC110501907 LOC106582447 coding upstream 36758 43501793 ~ 43549935 (+)
LOC110501906 LOC106582445 coding upstream 99930 43346803 ~ 43486763 (+)
LOC110501904 LOC106582430 coding upstream 354560 43230424 ~ 43232133 (+)
LOC110501905 LOC106582444 coding upstream 360300 43213840 ~ 43226393 (+)
LOC118943641 LOC106582431 coding downstream 193474 43850609 ~ 43853026 (+)
LOC118943642 LOC106582432 coding downstream 250524 43907659 ~ 43908820 (+)
LOC110501910 LOC106582449 coding downstream 313263 43970398 ~ 43971412 (+)
LOC118943610 LOC106576908 coding downstream 318880 43976015 ~ 43979227 (+)
LOC110502167 LOC106582449 coding downstream 335103 43992238 ~ 43995375 (+)
G1813209 NA non-coding upstream 45371 43541196 ~ 43541322 (+)
G1813208 NA non-coding upstream 47425 43536298 ~ 43539268 (+)
G1813240 NA non-coding upstream 56636 43529722 ~ 43530057 (+)
G1813302 NA non-coding downstream 6060 43663195 ~ 43663683 (+)
G1813332 NA non-coding downstream 67442 43724577 ~ 43735733 (+)
G1813354 NA non-coding downstream 184405 43841540 ~ 43890311 (+)
G1813419 NA non-coding downstream 310748 43967883 ~ 44005825 (+)
G1813439 NA non-coding downstream 358120 44015255 ~ 44015582 (+)
G1812953 NA other upstream 436309 43149762 ~ 43150384 (+)
LOC110502157 LOC106582435 other upstream 850826 42688215 ~ 42735867 (+)
G1812428 NA other upstream 862579 42723672 ~ 42724114 (+)
LOC110501889 LOC106582433 other upstream 1197406 42256417 ~ 42389468 (+)
G1810740 NA other upstream 2120344 41464478 ~ 41466349 (+)
G1813442 NA other downstream 451109 44108244 ~ 44110867 (+)
LOC110502169 LOC106582455 other downstream 661023 44148629 ~ 44324651 (+)
G1813588 ino80d other downstream 705526 44362661 ~ 44371923 (+)
G1813665 LOC106582464 other downstream 841322 44498457 ~ 44508051 (+)
LOC110501918 LOC106582467 other downstream 909753 44566863 ~ 44573921 (+)

Expression


Co-expression Network