G1814349


Basic Information

Item Value
gene id G1814349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 44496573 ~ 44573918 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2075661
TACTTGTTTAGCATGTAATTTATTAAATTAACAAACCTACATAAAATACATGAAGTAGTAGCAACATGAAGATATTGCCAGGGATCACTTTCAAGGTAACCCGTTGAAATGTACAAACTCTTCCAAATCTGATTGACCGTTTGCATTAGCCATGCAAGTATTAAAACCAGTAGCCATAATGTAATTTAgaccatttttttgttgttgttttcaaagCATATAGTCACACAGCTTTGACTCAATACATTCTGGAACCCTTAGTCTATGGCTCAATAATTGATGTATATTAGCACCTGTTAAACCAGGGGATAGAATATACGCCATCAAGATGGAGAAACAAAGACAAAGATACAGCCGTGATCAATATGGCAACTGATCATGCAAACGCCATTCAGAGTCCCAGCAGTTATGTCATGCAGGCTATTGAAAGCCACAACAATCACCAGACATAACTGATTAAGAATACAAGTCTAAGCTTCTTGAAAAGATCCcccttctctgaacagttgatatttctcgaagacaaaaaaataataataatattaatattgaACAAAATGTAGACATTAGTCTAGGAAGTTGCAGACTTCAAATATGCTATGAGATCTGCACGCTCTCCCTTCTTCTTGATGCCAGCAAAGATCATCTTTGTTCCTGGAATGTATTTCTTGGGGTTCTCCAAGTAAGTCATGAGGGTATCGGTATCCCAGACAATGCCTTGGCTTTGTTGGCATCCGTGTAGGAAAAGCCTTCCGCCTGTCCGGTCTTGCGTCCAAACAGACCCCAGAGGTTTGGCCCGACCTTGTGCTTCCCTCCATTTTCAACAGTATGGCACTGGGCACACTTCTGAACAAAAGCCTTTTTCCCCTTTTCAATGTCACCCATGTTTCCTATTGGACAATAAAAGTCAGAAGAGGTcagctacagtacacacacacacacacacacacacacacacacacacatactgtatacacaatcacacacacacacacacacacacacacacacata
>TU2075659
TACTTGTTTAGCATGTAATTTATTAAATTAACAAACCTACATAAAATACATGAAGTAGTAGCAACATGAAGATATTGCCAGGGATCACTTTCAAGGTAACCCGTTGAAATGTACAAACTCTTCCAAATCTGATTGACCGTTTGCATTAGCCATGCAAGTATTAAAACCAGTAGCCATAATGTAATTTAgaccatttttttgttgttgttttcaaagCATATAGTCACACAGCTTTGACTCAATACATTCTGGAACCCTTAGTCTATGGCTCAATAATTGATGTATATTAGCACCTGTTAAACCAGGGGATAGAATATACGCCATCAAGATGGAGAAACAAAGACAAAGATACAGCCGTGATCAATATGGCAACTGATCATGCAAACGCCATTCAGAGTCCCAGCAGTTATGTCATGCAGGCTATTGAAAGCCACAACAATCACCAGACATAACTGATTAAGAATACAAGTCTAAGCTTCTTGAAAAGATCCcccttctctgaacagttgatatttctcgaagacaaaaaaataataataatattaatattgaACAAAATGTAGACATTAGTCTAGGAAGTTGCAGACTTCAAATATGCTATGAGATCTGCACGCTCTCCCTTCTTCTTGATGCCAGCAAAGATCATCTTTGTTCCTGGAATGTATTTCTTGGGGTTCTCCAAGTAAGTCATGAGGGTATCGGTATCCCAGACAATGCCTGAAATCACCTTTGGCTTTGTTGGCATCCGTGTAGGAAAAGCCTTCCGCCTGTCCGGTCTTGCGTCCAAACAGACCCCAGAGGTTTGGCCCGACCTTGTGCTTCCCTCCATTTTCAACAGTATGGCACTGGGCACACTTCTGAACAAAAGCCTTTTTCCCCTTTTCAATGTCACCCATGTTTCCTATTGGACAATAAAAGTCAGAAGAGGTcagctacagtacacacacacacatatatatatatatacatatatata

Function

NR:

description
cytochrome c-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2075661 False 1014 lncRNA 0.40 3 44496573 44573918
TU2075659 True 976 lncRNA 0.39 2 44572849 44573918

Neighbor

gene id symbol gene type direction distance location
LOC110501914 LOC106582459 coding downstream 108872 44376582 ~ 44387701 (-)
LOC110501913 LOC106582458 coding downstream 127564 44355163 ~ 44369009 (-)
LOC118936581 NA coding downstream 478001 44014413 ~ 44018572 (-)
LOC118943594 LOC106576908 coding downstream 487398 44007225 ~ 44009175 (-)
LOC110502166 LOC106576908 coding downstream 541059 43953651 ~ 43955514 (-)
LOC110501919 LOC106582468 coding upstream 24436 44598354 ~ 44632193 (-)
LOC110502136 NA coding upstream 60966 44634884 ~ 44636332 (-)
LOC110501923 LOC106582471 coding upstream 85651 44659569 ~ 44664863 (-)
LOC110501924 hoxd3ab coding upstream 343561 44917479 ~ 44939556 (-)
LOC110501925 hoxd4ab coding upstream 354618 44928536 ~ 44933201 (-)
LOC110502171 LOC106582464 non-coding downstream 19178 44473683 ~ 44553607 (-)
G1814384 NA non-coding downstream 52811 44443162 ~ 44443762 (-)
G1814375 NA non-coding downstream 55017 44436030 ~ 44441556 (-)
G1814379 NA non-coding downstream 64976 44430612 ~ 44431597 (-)
G1814377 NA non-coding downstream 66055 44429066 ~ 44430518 (-)
G1814459 NA non-coding upstream 28014 44601932 ~ 44605341 (-)
G1814482 NA non-coding upstream 102386 44676304 ~ 44676524 (-)
G1814483 NA non-coding upstream 108463 44682381 ~ 44682708 (-)
G1814486 NA non-coding upstream 124825 44698743 ~ 44699067 (-)
G1812404 NA other downstream 1818813 42677257 ~ 42677760 (-)
LOC110502155 psd12 other downstream 1891553 42603998 ~ 42605768 (-)
G1812079 LOC106582433 other downstream 2107300 42386822 ~ 42389273 (-)
G1811042 NA other downstream 2891342 41604974 ~ 41605231 (-)
LOC110501886 rhg15 other downstream 3030926 41447899 ~ 41523764 (-)
G1814480 NA other upstream 99529 44673447 ~ 44673888 (-)
G1815615 LOC106582489 other upstream 1264832 45838750 ~ 45840982 (-)
G1816841 NA other upstream 2651633 47225551 ~ 47226646 (-)
G1816929 NA other upstream 2827204 47400985 ~ 47402047 (-)
G1817287 LOC106582526 other upstream 2897376 47471294 ~ 47473384 (-)

Expression


Co-expression Network