G1814788


Basic Information

Item Value
gene id G1814788
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45074542 ~ 45074833 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2076155
gttattagcagtagctaatacaaagacgcaagacttgaaaccaaacgatgtattgggtaagtatgaagccttccagaacattctgaacgaagaccatcgaaggtaagggaatatttatgcttaaatctgtgtttctgttgactccaacattacgtagaaatgtagcttgtaactgagcgccgtctcagcatattgaatagtgtgcgatttctgtaacgttaaaaataaatctaacaaagcggttgcataaagaagcagtgtatctttctaactatatgtagaacatgtatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2076155 True 292 lncRNA 0.36 1 45074542 45074833

Neighbor

gene id symbol gene type direction distance location
LOC110501931 lnpa coding upstream 52372 44944427 ~ 45022170 (+)
LOC110502137 LOC106582494 coding upstream 86698 44983911 ~ 44987844 (+)
LOC110501922 nf2l2 coding upstream 415973 44647142 ~ 44658569 (+)
LOC110501918 LOC106582467 coding upstream 500624 44566863 ~ 44573921 (+)
LOC110501916 LOC106582463 coding upstream 601674 44468192 ~ 44472868 (+)
LOC110501942 atp5g2 coding downstream 98058 45172891 ~ 45175477 (+)
LOC110501941 LOC106582491 coding downstream 101062 45175895 ~ 45251964 (+)
LOC118943613 LOC106582482 coding downstream 175949 45250782 ~ 45252926 (+)
LOC110502139 LOC106599004 coding downstream 187382 45262215 ~ 45267589 (+)
LOC110502173 LOC106582449 coding downstream 252276 45327109 ~ 45329041 (+)
G1814777 NA non-coding upstream 19130 45055199 ~ 45055412 (+)
G1814769 NA non-coding upstream 30892 45043364 ~ 45043650 (+)
G1814704 NA non-coding upstream 49958 45023458 ~ 45024584 (+)
G1814713 hoxd11 non-coding upstream 111028 44953926 ~ 44963514 (+)
G1814790 NA non-coding downstream 1986 45076819 ~ 45077038 (+)
G1814805 NA non-coding downstream 20549 45095382 ~ 45095736 (+)
G1814812 NA non-coding downstream 37577 45112410 ~ 45112727 (+)
G1814816 NA non-coding downstream 45963 45120796 ~ 45121074 (+)
G1814817 NA non-coding downstream 46486 45121319 ~ 45121539 (+)
G1813665 LOC106582464 other upstream 566491 44498457 ~ 44508051 (+)
G1813588 ino80d other upstream 702619 44362661 ~ 44371923 (+)
LOC110502169 LOC106582455 other upstream 754431 44148629 ~ 44324651 (+)
G1813442 NA other upstream 963675 44108244 ~ 44110867 (+)
G1814811 NA other downstream 35714 45110547 ~ 45111229 (+)
LOC110502177 LOC106582482 other downstream 447087 45521920 ~ 45527893 (+)
G1815113 LOC106582487 other downstream 650314 45725039 ~ 45726328 (+)
G1815137 NA other downstream 706666 45781499 ~ 45782536 (+)

Expression


Co-expression Network