G1814805



Basic Information


Item Value
gene id G1814805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 45095382 ~ 45095736 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2076172
tggcaGAATGAAACAGATTTCCCTCAAAAATTTCCCTATATTTAGCATCATCCATCATTCCTTGAATTCTGACTAATTTCCCAGTACATGCcaatgaaaaacacccccacagcacgATACTGCCACTACATGCTTCACTCTAGGGATGATGTTTTCGGGGtgatgttgggtttgcgccagacatagcattttccttgatggccaaaatgctaaattttagtctcatctgaccagagttccttcttccatatgtttggggagtctcccacatgccttttggcgaacacaaaacatgtttgcttatttttttctggacactcttccataaagcccagctctgtggagtgtatggctt

Function


NR:

description
putative transposase

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2076172 True 355 lncRNA 0.43 1 45095382 45095736

Neighbor


gene id symbol gene type direction distance location
LOC110501931 lnpa coding upstream 73212 44944427 ~ 45022170 (+)
LOC110502137 LOC106582494 coding upstream 107538 44983911 ~ 44987844 (+)
LOC110501922 nf2l2 coding upstream 436813 44647142 ~ 44658569 (+)
LOC110501918 LOC106582467 coding upstream 521464 44566863 ~ 44573921 (+)
LOC110501916 LOC106582463 coding upstream 622514 44468192 ~ 44472868 (+)
LOC110501942 atp5g2 coding downstream 77155 45172891 ~ 45175477 (+)
LOC110501941 LOC106582491 coding downstream 80159 45175895 ~ 45251964 (+)
LOC118943613 LOC106582482 coding downstream 155046 45250782 ~ 45252926 (+)
LOC110502139 LOC106599004 coding downstream 166479 45262215 ~ 45267589 (+)
LOC110502173 LOC106582449 coding downstream 231373 45327109 ~ 45329041 (+)
G1814790 NA non-coding upstream 18344 45076819 ~ 45077038 (+)
G1814788 NA non-coding upstream 20549 45074542 ~ 45074833 (+)
G1814777 NA non-coding upstream 39970 45055199 ~ 45055412 (+)
G1814769 NA non-coding upstream 51732 45043364 ~ 45043650 (+)
G1814704 NA non-coding upstream 70798 45023458 ~ 45024584 (+)
G1814812 NA non-coding downstream 16674 45112410 ~ 45112727 (+)
G1814816 NA non-coding downstream 25060 45120796 ~ 45121074 (+)
G1814817 NA non-coding downstream 25583 45121319 ~ 45121539 (+)
G1814820 NA non-coding downstream 28304 45124040 ~ 45124258 (+)
G1814824 NA non-coding downstream 34540 45130276 ~ 45130496 (+)
G1813665 LOC106582464 other upstream 587331 44498457 ~ 44508051 (+)
G1813588 ino80d other upstream 723459 44362661 ~ 44371923 (+)
LOC110502169 LOC106582455 other upstream 775271 44148629 ~ 44324651 (+)
G1813442 NA other upstream 984515 44108244 ~ 44110867 (+)
G1814811 NA other downstream 14811 45110547 ~ 45111229 (+)
LOC110502177 LOC106582482 other downstream 426184 45521920 ~ 45527893 (+)
G1815113 LOC106582487 other downstream 629411 45725039 ~ 45726328 (+)
G1815137 NA other downstream 685763 45781499 ~ 45782536 (+)

Expression



Co-expression Network