Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815316 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45217239 ~ 45221325 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076780 | True | 206 | lncRNA | 0.35 | 2 | 45217239 | 45221325 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943612 | NA | coding | downstream | 250105 | 44965636 ~ 44967134 (-) |
| LOC110501930 | hoxd12ab | coding | downstream | 254360 | 44959757 ~ 44962879 (-) |
| LOC110501928 | hoxd11ab | coding | downstream | 261174 | 44954300 ~ 44956065 (-) |
| LOC110501926 | hoxd10ab | coding | downstream | 266869 | 44947662 ~ 44950370 (-) |
| LOC110501927 | hoxd9ab | coding | downstream | 271952 | 44943212 ~ 44945287 (-) |
| LOC110502174 | LOC106572616 | coding | upstream | 143165 | 45343530 ~ 45365813 (-) |
| LOC118943595 | LOC106582449 | coding | upstream | 198560 | 45419885 ~ 45432246 (-) |
| LOC110501936 | LOC106572616 | coding | upstream | 235901 | 45457226 ~ 45458628 (-) |
| LOC118943614 | gdf3 | coding | upstream | 298522 | 45519847 ~ 45520832 (-) |
| LOC110501935 | gdf3 | coding | upstream | 311772 | 45533097 ~ 45543990 (-) |
| G1815310 | NA | non-coding | downstream | 6598 | 45197810 ~ 45210641 (-) |
| G1815256 | NA | non-coding | downstream | 45024 | 45165049 ~ 45172215 (-) |
| G1815262 | NA | non-coding | downstream | 94800 | 45122212 ~ 45122439 (-) |
| G1815260 | NA | non-coding | downstream | 96530 | 45118988 ~ 45120709 (-) |
| G1815259 | NA | non-coding | downstream | 97924 | 45118506 ~ 45119315 (-) |
| G1815317 | NA | non-coding | upstream | 1835 | 45223160 ~ 45232024 (-) |
| G1815325 | NA | non-coding | upstream | 21472 | 45242797 ~ 45243013 (-) |
| G1815396 | NA | non-coding | upstream | 154168 | 45375493 ~ 45414973 (-) |
| G1815400 | NA | non-coding | upstream | 168372 | 45389697 ~ 45449161 (-) |
| G1814480 | NA | other | downstream | 543351 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 663819 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 2539479 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2612219 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2827966 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 617425 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 2004226 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2179797 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2249969 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2840724 | 48057851 ~ 48064453 (-) |
