Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45223160 ~ 45232024 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2076781 | True | 553 | lncRNA | 0.35 | 2 | 45223160 | 45232024 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943612 | NA | coding | downstream | 256026 | 44965636 ~ 44967134 (-) |
| LOC110501930 | hoxd12ab | coding | downstream | 260281 | 44959757 ~ 44962879 (-) |
| LOC110501928 | hoxd11ab | coding | downstream | 267095 | 44954300 ~ 44956065 (-) |
| LOC110501926 | hoxd10ab | coding | downstream | 272790 | 44947662 ~ 44950370 (-) |
| LOC110501927 | hoxd9ab | coding | downstream | 277873 | 44943212 ~ 44945287 (-) |
| LOC110502174 | LOC106572616 | coding | upstream | 132466 | 45343530 ~ 45365813 (-) |
| LOC118943595 | LOC106582449 | coding | upstream | 187861 | 45419885 ~ 45432246 (-) |
| LOC110501936 | LOC106572616 | coding | upstream | 225202 | 45457226 ~ 45458628 (-) |
| LOC118943614 | gdf3 | coding | upstream | 287823 | 45519847 ~ 45520832 (-) |
| LOC110501935 | gdf3 | coding | upstream | 301073 | 45533097 ~ 45543990 (-) |
| G1815311 | NA | non-coding | downstream | 372 | 45210074 ~ 45222788 (-) |
| G1815316 | NA | non-coding | downstream | 1835 | 45217239 ~ 45221325 (-) |
| G1815315 | NA | non-coding | downstream | 2667 | 45215397 ~ 45220493 (-) |
| G1815310 | NA | non-coding | downstream | 12519 | 45197810 ~ 45210641 (-) |
| G1815256 | NA | non-coding | downstream | 50945 | 45165049 ~ 45172215 (-) |
| G1815325 | NA | non-coding | upstream | 10773 | 45242797 ~ 45243013 (-) |
| G1815396 | NA | non-coding | upstream | 143469 | 45375493 ~ 45414973 (-) |
| G1815400 | NA | non-coding | upstream | 157673 | 45389697 ~ 45449161 (-) |
| G1815402 | NA | non-coding | upstream | 160272 | 45392296 ~ 45433726 (-) |
| G1814480 | NA | other | downstream | 549272 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 669740 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 2545400 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 2618140 | 42603998 ~ 42605768 (-) |
| G1812079 | LOC106582433 | other | downstream | 2833887 | 42386822 ~ 42389273 (-) |
| G1815615 | LOC106582489 | other | upstream | 606726 | 45838750 ~ 45840982 (-) |
| G1816841 | NA | other | upstream | 1993527 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 2169098 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 2239270 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 2830025 | 48057851 ~ 48064453 (-) |
