Gene
RNA
| Item | Value |
|---|---|
| gene id | G1815588 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 45796264 ~ 45796484 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC107662224 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2077114 | True | 221 | lncRNA | 0.41 | 1 | 45796264 | 45796484 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gatd3a | LOC106582488 | coding | upstream | 43174 | 45627869 ~ 45753090 (+) |
| LOC110501934 | LOC106582485 | coding | upstream | 114249 | 45669820 ~ 45682015 (+) |
| LOC110502172 | fam160a2 | coding | upstream | 140171 | 45606721 ~ 45656093 (+) |
| LOC110501945 | NA | coding | upstream | 189763 | 45587722 ~ 45606501 (+) |
| LOC110502177 | LOC106582482 | coding | upstream | 268371 | 45521920 ~ 45527893 (+) |
| LOC110501937 | LOC106582489 | coding | downstream | 42251 | 45838735 ~ 45841019 (+) |
| LOC110501938 | LOC106582481 | coding | downstream | 72824 | 45869308 ~ 45871541 (+) |
| ercc1 | ercc1 | coding | downstream | 136321 | 45932805 ~ 45940900 (+) |
| LOC110501949 | LOC106582502 | coding | downstream | 157879 | 45954363 ~ 45971125 (+) |
| LOC100136162 | gbp | coding | downstream | 185120 | 45981604 ~ 46008178 (+) |
| G1815586 | NA | non-coding | upstream | 2829 | 45793164 ~ 45793435 (+) |
| G1815114 | NA | non-coding | upstream | 15747 | 45780078 ~ 45780517 (+) |
| G1815113 | LOC106582487 | non-coding | upstream | 69936 | 45725039 ~ 45726328 (+) |
| G1815055 | NA | non-coding | upstream | 93531 | 45702195 ~ 45702733 (+) |
| G1815591 | NA | non-coding | downstream | 17472 | 45813956 ~ 45814168 (+) |
| G1815594 | NA | non-coding | downstream | 24065 | 45820549 ~ 45820849 (+) |
| G1815598 | NA | non-coding | downstream | 36954 | 45833438 ~ 45833704 (+) |
| G1815600 | NA | non-coding | downstream | 39772 | 45836256 ~ 45836484 (+) |
| G1815625 | NA | non-coding | downstream | 49616 | 45846100 ~ 45846317 (+) |
| G1815137 | NA | other | upstream | 13728 | 45781499 ~ 45782536 (+) |
| LOC110501942 | atp5g2 | other | upstream | 620792 | 45172891 ~ 45175477 (+) |
| G1814811 | NA | other | upstream | 685035 | 45110547 ~ 45111229 (+) |
| LOC110501947 | LOC106582498 | other | downstream | 362175 | 46157212 ~ 46170323 (+) |
| G1815855 | NA | other | downstream | 380123 | 46176607 ~ 46177757 (+) |
| G1816074 | NA | other | downstream | 538356 | 46334840 ~ 46335370 (+) |
| G1816206 | LOC106581610 | other | downstream | 956407 | 46752891 ~ 46770563 (+) |
| G1816706 | NA | other | downstream | 1287776 | 47084260 ~ 47085389 (+) |
