XLOC_037294 (BX601644.6)


Basic Information

Item Value
gene id XLOC_037294
gene name BX601644.6
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 34822849 ~ 34828098 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073391
GGAAACCTCTGGAGCGCCTTGATGCGGCGTACAGTTTACCTACAGGCAGGGCTTTGTCTCTGCCAGCCTCTTCCCTGTGAGCGGATGAGAGCTGCATGACTACCGTAACACACATCCAGCCCTCGTACAGCAGCAGGAGACGGAGCTCACAGCGGGATTCCCCAAATCCCTGGCCTTCCTTGCTCGACCATGTCCACAAATGAAAGGGAAGAGGACCACACAGGAACCAACGACGACGCCGTGTCACTGTTCAAAACAGACACCCCTGTAAACACAACACATGCTTCACATGGGCTGATCGTTGCAGTTTCACGCTTATCAAAAATAAGCATCGGGCTGGATGCACCTCTCGCCGCTACCTTCGCAGAATCTCAAGTATCTTATGCAAACTGTGTGCGTTTGTTGGGGAGCTCTGGCAGCGACTGATGAGTGTCTCATTATCTCCACACCAGCCGTACACAGTAAGAAGAGCATAATCAAAGCCTGGGGGATATTTCAATTTGATGCTCAACAAGCTGAGCCTGAGATTAAAGGATCATACGTGTCATCCACACAAACATCACTTCCAGAGCAGGCGAGCGTACGTGAGCTCAGCTTTTCCAAGAGAGAGGCGTCACCGCCGCAGACGACGCAGTCGCACTTCTgtctccctgtgtgtgtgtgtgtgtgcaactgAAGGCTGATGCGATGCTTCTCACATGTTTGAGATGTCGAGGAAGGAGTCTTTCCTttttttacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgacGAATTTtgcttttaagaaatatttatgaGCCGGTAcccttcttaaaaaaaaaaaaaaaggaaaaaaagaaagcgTTGTCTTTAATGAACATGTTTTAGAGATTGTTTCAGCATCTAT
>TCONS_00073392
ctacaaaatttcaacaaaatatttcttttttttttttgcttttattaatttttcctaataatatttttctataacataaactTGGGTGTACTCGTTTTTGGACCTTTATCGTAAGTTATGTTAaacaagctccagatttggcttcagcactgactaatctaatgtatatgcacaaatataagattgtatagcttcctattaaaaatatgaatttaaaagatagatttgtgaggggtgtacttaaacatatatgctgagcattgtacaTATACTGCCATTTTTGTATGCCTTCATTGGACAAAACAACTTATTTTactatgttttatattatattctgCCAGCACAGCCTACATCATAGTGCCTAACCAGGGGTCAGGGCTCAGAACTGAAAGCAGATCGGCTAAGTAATTGCCTGTAACTCAGGTGTTAGGGGAATGTGCTGGTCAAAGGtcagagtttttgtttttttgctgaacagaaaaaaaaaatggccacCAAACTGCATTTCAATTGACAACTCATTATAATCTCTCCAAACGCCTGTCACTCTTCCCTGTCCAGATTCCCCAAATCCCTGGCCTTCCTTGCTCGACCATGTCCACAAATGAAAGGGAAGAGGACCACACAGGAACCAACGACGACGCCGTGTCACTGTTCAAAACAGACACCCCTGTAAACACAACACATGCTTCACATGGGCTGATCGTTGCAGTTTCACGCTTATCAAAAATAAGCATCGGGCTGGATGCACCTCTCGCCGCTACCTTCGCAGAATCTCAAGTATCTTATGCAAACTGTGTGCGTTTGTTGGGGAGCTCTGGCAGCGACTGATGAGTGTCTCATTATCTCCACACCAGCCGTACACAGTAAGAAGAGCATAATCAAAGCCTGGGGGATATTTCAATTTGATGCTCAACAAGCTGAGCCTGAGATTAAAGGATCATACGTGTCATCCACACAAACATCACTTCCAGAGCAGGCGAGCGTACGTGAGCTCAGCTTTTCCAAGAGAGAGGCGTCACCGCCGCAGACGACGCAGTCGCACTTCTgtctccctgtgtgtgtgtgtgtgtgcaactgAAGGCTGATGCGATGCTTCTCACATGTTTGAGATGTCGAGGAAGGAGTCTTTCCTttttttacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtacgtgtgacGAATTTtgcttttaagaaatatttatgaGCCGGTAcccttcttaaaaaaaaaaaaaaaggaaaaaaagaaagcgTTGTCTTTAATGAACATGTTTTAGAGATTGTTTCAGCATCTAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117399

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073391 False 894 lncRNA 0.48 3 34822849 34828098
TCONS_00073392 True 1299 lncRNA 0.41 2 34826665 34828098

Neighbor

gene id symbol gene type direction distance location
XLOC_037293 BX601644.1 coding upstream 31962 34790750 ~ 34790887 (+)
XLOC_037292 shox coding upstream 175154 34641237 ~ 34647695 (+)
XLOC_037291 si:ch211-269e2.1 coding upstream 340151 34433053 ~ 34482698 (+)
XLOC_037290 med14 coding upstream 393274 34397516 ~ 34429575 (+)
XLOC_037289 NA coding upstream 431696 34390451 ~ 34391153 (+)
XLOC_037295 tfdp1a coding downstream 122844 34950942 ~ 34968429 (+)
XLOC_037296 CR936415.1 coding downstream 141352 34969450 ~ 34969567 (+)
XLOC_037297 NA coding downstream 142745 34970843 ~ 34973324 (+)
XLOC_037298 jam2b coding downstream 168147 34996245 ~ 35010396 (+)
XLOC_037299 gabpa coding downstream 186415 35014513 ~ 35030107 (+)
XLOC_037287 NA non-coding upstream 444517 34370860 ~ 34378332 (+)
XLOC_037285 NA non-coding upstream 526725 34286754 ~ 34296124 (+)
XLOC_037279 NA non-coding upstream 814283 33997142 ~ 34008566 (+)
XLOC_037301 NA non-coding downstream 332546 35160644 ~ 35167934 (+)
XLOC_037302 CU074387.1 non-coding downstream 601104 35429202 ~ 35429316 (+)
XLOC_037307 NA non-coding downstream 1159746 35987844 ~ 36102672 (+)

Expression


Co-expression Network