Gene
RNA
| Item | Value |
|---|---|
| gene id | G1816444 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 46733726 ~ 46734065 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Repetitive proline-rich cell wall protein 2, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2078091 | True | 340 | lncRNA | 0.50 | 1 | 46733726 | 46734065 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ints6 | LOC106582497 | coding | downstream | 576754 | 46119388 ~ 46156972 (-) |
| LOC118943596 | NA | coding | downstream | 705220 | 46011115 ~ 46028506 (-) |
| LOC110501932 | LOC106582487 | coding | downstream | 1007332 | 45702953 ~ 45726394 (-) |
| LOC110501943 | NA | coding | downstream | 1146014 | 45582551 ~ 45587712 (-) |
| LOC110501933 | LOC106582484 | coding | downstream | 1154820 | 45550854 ~ 45578906 (-) |
| spopla | spopl | coding | upstream | 135766 | 46869775 ~ 46974132 (-) |
| LOC110501995 | hnmt | coding | upstream | 308160 | 47042225 ~ 47061327 (-) |
| LOC110501994 | hnmt | coding | upstream | 352806 | 47086871 ~ 47103828 (-) |
| trpm2 | LOC106582587 | coding | upstream | 436338 | 47170403 ~ 47260466 (-) |
| cfap65 | cfap65 | coding | upstream | 743563 | 47476398 ~ 47553609 (-) |
| G1816443 | NA | non-coding | downstream | 2896 | 46730603 ~ 46730830 (-) |
| G1816442 | NA | non-coding | downstream | 3466 | 46730031 ~ 46730260 (-) |
| G1816441 | NA | non-coding | downstream | 3773 | 46729706 ~ 46729953 (-) |
| G1816440 | LOC106582580 | non-coding | downstream | 4647 | 46726295 ~ 46729079 (-) |
| G1816433 | NA | non-coding | downstream | 20720 | 46710967 ~ 46713006 (-) |
| G1816445 | NA | non-coding | upstream | 724 | 46734789 ~ 46734994 (-) |
| G1816448 | NA | non-coding | upstream | 2681 | 46736746 ~ 46737041 (-) |
| G1816451 | NA | non-coding | upstream | 6345 | 46740410 ~ 46740623 (-) |
| G1816454 | NA | non-coding | upstream | 9719 | 46743784 ~ 46744220 (-) |
| G1816471 | LOC101063024 | non-coding | upstream | 33013 | 46767078 ~ 46771482 (-) |
| G1815615 | LOC106582489 | other | downstream | 892744 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 2059838 | 44673447 ~ 44673888 (-) |
| LOC110502171 | LOC106582464 | other | downstream | 2180306 | 44473683 ~ 44553607 (-) |
| G1812404 | NA | other | downstream | 4055966 | 42677257 ~ 42677760 (-) |
| LOC110502155 | psd12 | other | downstream | 4128706 | 42603998 ~ 42605768 (-) |
| G1816841 | NA | other | upstream | 491486 | 47225551 ~ 47226646 (-) |
| G1816929 | NA | other | upstream | 667057 | 47400985 ~ 47402047 (-) |
| G1817287 | LOC106582526 | other | upstream | 737229 | 47471294 ~ 47473384 (-) |
| LOC110501953 | ihh | other | upstream | 1327984 | 48057851 ~ 48064453 (-) |
| G1817668 | NA | other | upstream | 1534722 | 48268787 ~ 48291496 (-) |
