G1817287 (LOC106582526)


Basic Information

Item Value
gene id G1817287
gene name LOC106582526
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 47471294 ~ 47473384 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2079216
TTCTCTTCGAGGTTGGTGATGGGGCTACAGGATACCATGTACTCTGAGCTCTGGGGAACACCCTGCCATGAGATGGTTGTGCGTGTCTGGGCCTCCTGCGGCACCCCAAACCCGGTCTCATTCTCAGGGAACCCAAACGGAAGACCCGATAACGGACCATCGCTCACCCGGACCAGGGGCACTCTCTGGCCATCGGGGCCTGGGACGGGGATGTAGACTAGGGGTTCACGGTGGTGGATAGCTGGACCCTGGTTGTCCCTGCCGTTGGGGTTGGGGCCCAGGCTCTGGTACTCTGTGTAGATGTGCTGGCCCTGCTGGCCCAGCGTGTCCTGGCCGTTAGTCCCCACCAGCTGGACGTGGTTGGGGTTCAAGTTGGGGTTGAGGGGAAAGTTGGGGTTCATGTTGGGGTTCCCGTTGGGGTTGAGGGGAAAGTTGGGGTTAGGATTGGGGTTGGGGTTGAGGGGAAAGTTGGGGTTAGGATTGGTGTTGGGGTTGCTGTTAGGGTTGAACTGGTTGGGGTTAACGTTGAAATTTCCATTGGGGTTGGTGTTGGGGTTCCCATTGGGGTTGAAGTGGAAGTTAGGATTGGGATTCACGTGGAAGTTGGGGTTACCATTGGGGTTGAACTGGTCGGGGTTGCCGTTTGGGTTGAGGGGaaagttggggttagggttggtgttGGTGGGGTAGTTGGGGTTTCCATTGGGGTTGAACTGGTCGGGGTTGCCGTTTGGGTTGAGGGGaaagttggggttagggttggtgttGGGTGGGTAGTTGGGGTTAACCTCGTCCTCGGGCACATCCAGGATATCGGGGCTGGGCCGGTGGGACACAGGGAGCTGGGATGCCAGTTCTAGCAGAGAGACGGGTTAGGAGCAGAGCAAGCAGAGCGTTAGAGACTGG

Function

NR:

description
fibronectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2079216 True 906 TUCP 0.58 3 47471294 47473384

Neighbor

gene id symbol gene type direction distance location
trpm2 LOC106582587 coding downstream 210828 47170403 ~ 47260466 (-)
LOC110501994 hnmt coding downstream 367466 47086871 ~ 47103828 (-)
LOC110501995 hnmt coding downstream 409967 47042225 ~ 47061327 (-)
spopla spopl coding downstream 497162 46869775 ~ 46974132 (-)
ints6 LOC106582497 coding downstream 1314322 46119388 ~ 46156972 (-)
cfap65 cfap65 coding upstream 4244 47476398 ~ 47553609 (-)
LOC110501961 LOC106582505 coding upstream 155496 47628880 ~ 47635640 (-)
ptprna LOC106582506 coding upstream 259835 47733219 ~ 47834254 (-)
tmem198a LOC106582514 coding upstream 423673 47897057 ~ 47972131 (-)
LOC110501953 ihh coding upstream 584467 48057851 ~ 48064453 (-)
G1816929 NA non-coding downstream 69247 47400985 ~ 47402047 (-)
G1816915 NA non-coding downstream 80898 47389657 ~ 47390396 (-)
G1816897 NA non-coding downstream 111794 47359037 ~ 47359500 (-)
G1816896 NA non-coding downstream 114621 47356075 ~ 47356673 (-)
G1816836 NA non-coding downstream 183872 47261251 ~ 47287422 (-)
G1817290 NA non-coding upstream 10346 47483730 ~ 47484440 (-)
G1817318 NA non-coding upstream 45592 47518976 ~ 47521583 (-)
G1817319 NA non-coding upstream 46930 47520314 ~ 47527293 (-)
G1817320 NA non-coding upstream 51737 47525121 ~ 47525354 (-)
G1816841 NA other downstream 244648 47225551 ~ 47226646 (-)
G1815615 LOC106582489 other downstream 1630312 45838750 ~ 45840982 (-)
G1814480 NA other downstream 2797406 44673447 ~ 44673888 (-)
LOC110502171 LOC106582464 other downstream 2917874 44473683 ~ 44553607 (-)
G1817668 NA other upstream 795403 48268787 ~ 48291496 (-)
G1817836 NA other upstream 985642 48459026 ~ 48460040 (-)
G1817968 NA other upstream 996214 48469598 ~ 48470035 (-)
G1818059 NA other upstream 1153980 48627364 ~ 48627846 (-)

Expression


Co-expression Network