XLOC_037307


Basic Information

Item Value
gene id XLOC_037307
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 35987844 ~ 36102672 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075170
TGCTGCTTGGTCTTCGCCCACAAAATTACATTTGAGGTCCTCTGGGACATCAGTCAATGGGTGtgcTGCAAGAAACAGATTCCAGTTCTCCGAGGAAAATTATTTCTTCTCTGTGTCGGTATATAGAAAATTCAGGTTGATGACCAGCCGTGATTGTGCTTTGGAAACCTGTCTCAGCCTCCAGCTAAACTGCTCATCCATGACCAATCGATGGTAGGAGCCCACCGATGGAGGAAGATTCTGAGTTTGCACGCGTTTTGTGTGAGCGACTGGTCACCCCATCCCGGCTCCCCTCTGGAGCACAGCCAAGCTTTATTACTGAGCAAGAGAGGGAAACAGGCCTGTCACAGACAAAGTGATAAAGCATCATTACCACACTGCAGAGGAGGAATGAGGCCAGCCCGCTCTGACACAACTCCTTTCATAAAGAGCTTCACTCCGGCATATTGGACAGCCAGTCAAAGAGCTCCAGCAAAGAACAAAATGACTAGTCTGGCCAAATCCTATGCTGGTATTGACATCCACTCTTTCATTACGCCCCACTGCGCTGTACTGCACCACAGGCTCCGGCGCTCTGGTGTGACTTTACACACGCTGCCATCAGAGCCTTCGCATGATAGATGAAATATTTCATTTCACAAAGCAAGTGGCGCCCGTGACAGGATGAGTTGAAAtgatttagactagaaacaagtggAAACATCAAGCATCGTTCAAGACTTGTTAGCCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075170 True 731 lncRNA 0.49 4 35987844 36102672

Neighbor

gene id symbol gene type direction distance location
XLOC_037306 atp1a1b coding upstream 65643 35901554 ~ 35922201 (+)
XLOC_037305 mab21l3 coding upstream 102584 35876927 ~ 35885260 (+)
XLOC_037304 rcan1a coding upstream 122316 35843732 ~ 35865528 (+)
XLOC_037303 si:dkey-67c22.2 coding upstream 145469 35832294 ~ 35842375 (+)
XLOC_037302 CU074387.1 coding upstream 558528 35429202 ~ 35429316 (+)
XLOC_037308 NA coding downstream 22081 36124753 ~ 36177421 (+)
XLOC_037309 lrp1bb coding downstream 212195 36314867 ~ 36694998 (+)
XLOC_037310 NA coding downstream 667992 36770664 ~ 36775514 (+)
XLOC_037311 BX664716.2 coding downstream 691712 36794384 ~ 36797834 (+)
XLOC_037312 NA coding downstream 825383 36928055 ~ 36932532 (+)
XLOC_037301 NA non-coding upstream 819910 35160644 ~ 35167934 (+)
XLOC_037297 NA non-coding upstream 1014520 34970843 ~ 34973324 (+)
XLOC_037296 CR936415.1 non-coding upstream 1018277 34969450 ~ 34969567 (+)
XLOC_037294 BX601644.6 non-coding upstream 1159746 34822849 ~ 34828098 (+)
XLOC_037315 NA non-coding downstream 888491 36991163 ~ 36991851 (+)

Expression


Co-expression Network