Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817540 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48030015 ~ 48030821 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: myc box-dependent-interacting protein 1 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079527 | True | 617 | lncRNA | 0.44 | 2 | 48030015 | 48030821 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem198a | LOC106582514 | coding | downstream | 57884 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 195761 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 394375 | 47628880 ~ 47635640 (-) |
| cfap65 | cfap65 | coding | downstream | 476406 | 47476398 ~ 47553609 (-) |
| trpm2 | LOC106582587 | coding | downstream | 769549 | 47170403 ~ 47260466 (-) |
| LOC110501953 | ihh | coding | upstream | 27030 | 48057851 ~ 48064453 (-) |
| LOC110501956 | itgav | coding | upstream | 108940 | 48139761 ~ 48220042 (-) |
| LOC110502188 | LOC106582504 | coding | upstream | 474624 | 48505445 ~ 48645921 (-) |
| LOC118943644 | NA | coding | upstream | 931391 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 1439281 | 49470102 ~ 49480960 (-) |
| G1817526 | bin1 | non-coding | downstream | 19369 | 47988167 ~ 48010646 (-) |
| G1817479 | NA | non-coding | downstream | 107842 | 47921536 ~ 47922173 (-) |
| G1817460 | NA | non-coding | downstream | 152178 | 47870020 ~ 47877837 (-) |
| G1817451 | NA | non-coding | downstream | 177374 | 47852361 ~ 47852641 (-) |
| G1817448 | NA | non-coding | downstream | 189105 | 47840691 ~ 47840910 (-) |
| G1817541 | NA | non-coding | upstream | 572 | 48031393 ~ 48034662 (-) |
| G1817543 | bin1 | non-coding | upstream | 9209 | 48040030 ~ 48080797 (-) |
| G1817549 | NA | non-coding | upstream | 44344 | 48075165 ~ 48076165 (-) |
| G1817593 | NA | non-coding | upstream | 98621 | 48129442 ~ 48130249 (-) |
| G1817545 | NA | non-coding | upstream | 105586 | 48136407 ~ 48137488 (-) |
| G1817287 | LOC106582526 | other | downstream | 556631 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 627968 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 803369 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 2189033 | 45838750 ~ 45840982 (-) |
| G1814480 | NA | other | downstream | 3356127 | 44673447 ~ 44673888 (-) |
| G1817668 | NA | other | upstream | 237966 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 428205 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 438777 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 596543 | 48627364 ~ 48627846 (-) |
