XLOC_037308



Basic Information


Item Value
gene id XLOC_037308
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 36124753 ~ 36177421 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00075171
GTTTAGAAACGTGACAGCAACGTTTAGATGCTCGCCGACCTGAACGGATGTCCAATTTCAACGTATCCACTATTAGGACGACAAAACATAACAGGCCTATAAGCGAGCGTGAACTGCAGAGAAAGCCTGAAGCAGAGCAGACAGATATTACAGCAGTGACCCTGGCCTTTTATCAGCCTCGCTGTACCACAGCCTTTAATAAGACTTTATGGATCTAGTGATGGGCAGGCATTATAGCCAGAGGCTTCACCCAAACACCGCTGTGATTCTTGGTGATATGTTTTCATGATGAATTGTAGAGCGAGCGTATCTGTTTGTCCCAATGTCAAAGACGCGATTCTGCTTGGAACATTTATTTTGGTGAGGACAGCTGTTGCATTGGTCCCCTACAGCAGTCGGTGGTGCCAACCACCTTGGCACCCCTTAAAAAATGATGTAGATAAAAGGGGCTGCATTTGAGGCCATGTCTCAGAGCACACAACATATTGTCAGccctgaataaataaaaaagaggctCGTGGCTTAGAATAGATCACATTAAGCTGCTTTTTCAACCGCTGCATGTGTGCTGCTTTTTTAAAGCGATActctcaaataaaatatttttttaatggttt

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00075171 True 617 lncRNA 0.44 3 36124753 36177421

Neighbor


gene id symbol gene type direction distance location
XLOC_037307 NA coding upstream 22081 35987844 ~ 36102672 (+)
XLOC_037306 atp1a1b coding upstream 202552 35901554 ~ 35922201 (+)
XLOC_037305 mab21l3 coding upstream 239493 35876927 ~ 35885260 (+)
XLOC_037304 rcan1a coding upstream 259225 35843732 ~ 35865528 (+)
XLOC_037303 si:dkey-67c22.2 coding upstream 282378 35832294 ~ 35842375 (+)
XLOC_037309 lrp1bb coding downstream 137446 36314867 ~ 36694998 (+)
XLOC_037310 NA coding downstream 593243 36770664 ~ 36775514 (+)
XLOC_037311 BX664716.2 coding downstream 616963 36794384 ~ 36797834 (+)
XLOC_037312 NA coding downstream 750634 36928055 ~ 36932532 (+)
XLOC_037313 si:dkey-3d4.3 coding downstream 768919 36946340 ~ 36956667 (+)
XLOC_037302 CU074387.1 non-coding upstream 695437 35429202 ~ 35429316 (+)
XLOC_037301 NA non-coding upstream 956819 35160644 ~ 35167934 (+)
XLOC_037297 NA non-coding upstream 1151429 34970843 ~ 34973324 (+)
XLOC_037296 CR936415.1 non-coding upstream 1155186 34969450 ~ 34969567 (+)
XLOC_037315 NA non-coding downstream 813742 36991163 ~ 36991851 (+)
XLOC_037317 BX548071.1 non-coding downstream 1004019 37181440 ~ 37181557 (+)

Expression



Co-expression Network