Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817601 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48169683 ~ 48169915 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079620 | True | 213 | lncRNA | 0.41 | 2 | 48169683 | 48169915 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501953 | ihh | coding | downstream | 105230 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 197552 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 335429 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 534043 | 47628880 ~ 47635640 (-) |
| cfap65 | cfap65 | coding | downstream | 616074 | 47476398 ~ 47553609 (-) |
| LOC110502188 | LOC106582504 | coding | upstream | 335530 | 48505445 ~ 48645921 (-) |
| LOC118943644 | NA | coding | upstream | 792297 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 1300187 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1952973 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 2290179 | 50460094 ~ 50465680 (-) |
| G1817597 | NA | non-coding | downstream | 15815 | 48153058 ~ 48153868 (-) |
| G1817545 | NA | non-coding | downstream | 32195 | 48136407 ~ 48137488 (-) |
| G1817593 | NA | non-coding | downstream | 39434 | 48129442 ~ 48130249 (-) |
| G1817543 | bin1 | non-coding | downstream | 88886 | 48040030 ~ 48080797 (-) |
| G1817549 | NA | non-coding | downstream | 93518 | 48075165 ~ 48076165 (-) |
| G1817609 | NA | non-coding | upstream | 29230 | 48199145 ~ 48199900 (-) |
| G1817610 | NA | non-coding | upstream | 32127 | 48202042 ~ 48202338 (-) |
| G1817636 | NA | non-coding | upstream | 82096 | 48252011 ~ 48252265 (-) |
| G1817663 | NA | non-coding | upstream | 83277 | 48253192 ~ 48287549 (-) |
| G1817677 | NA | non-coding | upstream | 125383 | 48295298 ~ 48298062 (-) |
| G1817287 | LOC106582526 | other | downstream | 696299 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 767636 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 943037 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 2328701 | 45838750 ~ 45840982 (-) |
| G1817668 | NA | other | upstream | 98872 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 289111 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 299683 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 457449 | 48627364 ~ 48627846 (-) |
| G1818393 | NA | other | upstream | 955599 | 49125514 ~ 49126117 (-) |
