Gene
RNA
| Item | Value |
|---|---|
| gene id | G1817609 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48199145 ~ 48199900 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2079628 | True | 326 | lncRNA | 0.50 | 2 | 48199145 | 48199900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110501953 | ihh | coding | downstream | 134692 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 227014 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 364891 | 47733219 ~ 47834254 (-) |
| LOC110501961 | LOC106582505 | coding | downstream | 563505 | 47628880 ~ 47635640 (-) |
| cfap65 | cfap65 | coding | downstream | 645536 | 47476398 ~ 47553609 (-) |
| LOC110502188 | LOC106582504 | coding | upstream | 305545 | 48505445 ~ 48645921 (-) |
| LOC118943644 | NA | coding | upstream | 762312 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 1270202 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1922988 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 2260194 | 50460094 ~ 50465680 (-) |
| G1817601 | NA | non-coding | downstream | 29230 | 48169683 ~ 48169915 (-) |
| G1817597 | NA | non-coding | downstream | 45277 | 48153058 ~ 48153868 (-) |
| G1817545 | NA | non-coding | downstream | 61657 | 48136407 ~ 48137488 (-) |
| G1817593 | NA | non-coding | downstream | 68896 | 48129442 ~ 48130249 (-) |
| G1817543 | bin1 | non-coding | downstream | 118348 | 48040030 ~ 48080797 (-) |
| G1817610 | NA | non-coding | upstream | 2142 | 48202042 ~ 48202338 (-) |
| G1817636 | NA | non-coding | upstream | 52111 | 48252011 ~ 48252265 (-) |
| G1817663 | NA | non-coding | upstream | 53292 | 48253192 ~ 48287549 (-) |
| G1817677 | NA | non-coding | upstream | 95398 | 48295298 ~ 48298062 (-) |
| G1817688 | NA | non-coding | upstream | 108970 | 48308870 ~ 48310462 (-) |
| G1817287 | LOC106582526 | other | downstream | 725761 | 47471294 ~ 47473384 (-) |
| G1816929 | NA | other | downstream | 797098 | 47400985 ~ 47402047 (-) |
| G1816841 | NA | other | downstream | 972499 | 47225551 ~ 47226646 (-) |
| G1815615 | LOC106582489 | other | downstream | 2358163 | 45838750 ~ 45840982 (-) |
| G1817668 | NA | other | upstream | 68887 | 48268787 ~ 48291496 (-) |
| G1817836 | NA | other | upstream | 259126 | 48459026 ~ 48460040 (-) |
| G1817968 | NA | other | upstream | 269698 | 48469598 ~ 48470035 (-) |
| G1818059 | NA | other | upstream | 427464 | 48627364 ~ 48627846 (-) |
| G1818393 | NA | other | upstream | 925614 | 49125514 ~ 49126117 (-) |
