G1817836


Basic Information

Item Value
gene id G1817836
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 48459026 ~ 48460040 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2079931
ccttatatgcgtcgcggaagttagagtaacaatgatccaaggtctttccacccctggttgcgcaatcgatatgctgataaaatttagggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctccggatgaatggtttccagtttgcaaagagttaaataaagtttgttcagagccatcgatgtgtctgcttggggggggatatatacggctgtgattataatcgaagagaattctcttggtagataatgcggtctacatttgattgtgaggaattctaaatcaggtgaactgaaggatttgagttcctgtatgtttccttcatcacaccatgtcacgttagccataaggcatacgcccccgcccctcttcttaccagaaagatgtttgtttctgtctgcgcgatgcgtggagaaacccgttggctgcaccgcctcggatagcgtctctccagtgagccacgtttccgtgaagcaaagaacgttacagtctctgatgtccctctggaatgctacccttgctcggatttcatcaaccttgttgtcaagagactggacattggcaagaagaatgctagggagtggtgcacggtgtgcccgtctccggagtctgaccagaagaccgcctcgtttccctctttttcggagtcgtttttttgggtcgctgcatggaatccactccgttgtcctgtttgtaaggcagaacacaggatccgcgtcgcgaaaaacatattcttggtcgtactgatggtgagttgacgctgatcttatattcagtagttcttctcgactgtatgtaatgaaacctaagatgacctggggtactaatgtaagaaataacacgtaaaaaaacaaaaaactgcatagtttcctaggaacgcgaagcgaggcggtcgtctctgtcggcgccggaagtaactaatgtgtggatgtgtggatgtaaCGGGCACTGTGGATGTAACGGGCACTATGTATGTAACGGGCACTGTGTATGTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2079931 True 1015 TUCP 0.47 1 48459026 48460040

Neighbor

gene id symbol gene type direction distance location
LOC110501956 itgav coding downstream 238984 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 394573 48057851 ~ 48064453 (-)
tmem198a LOC106582514 coding downstream 486895 47897057 ~ 47972131 (-)
ptprna LOC106582506 coding downstream 624772 47733219 ~ 47834254 (-)
LOC110501961 LOC106582505 coding downstream 823386 47628880 ~ 47635640 (-)
LOC110502188 LOC106582504 coding upstream 45405 48505445 ~ 48645921 (-)
LOC118943644 NA coding upstream 502172 48962212 ~ 48964633 (-)
LOC118943599 NA coding upstream 1010062 49470102 ~ 49480960 (-)
prkag3b LOC106592041 coding upstream 1662848 50122888 ~ 50243945 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 2000054 50460094 ~ 50465680 (-)
G1817830 NA non-coding downstream 3595 48455230 ~ 48455431 (-)
G1817813 NA non-coding downstream 18766 48440023 ~ 48440260 (-)
G1817786 NA non-coding downstream 39099 48419727 ~ 48419927 (-)
G1817773 NA non-coding downstream 48360 48410385 ~ 48410666 (-)
G1817765 NA non-coding downstream 62291 48392315 ~ 48396735 (-)
G1817839 NA non-coding upstream 946 48460986 ~ 48461265 (-)
G1818030 NA non-coding upstream 122522 48582562 ~ 48582970 (-)
G1818033 NA non-coding upstream 127660 48587700 ~ 48589106 (-)
G1818034 NA non-coding upstream 131371 48591411 ~ 48592271 (-)
G1817668 NA other downstream 167530 48268787 ~ 48291496 (-)
G1817287 LOC106582526 other downstream 985642 47471294 ~ 47473384 (-)
G1816929 NA other downstream 1056979 47400985 ~ 47402047 (-)
G1816841 NA other downstream 1232380 47225551 ~ 47226646 (-)
G1817968 NA other upstream 9558 48469598 ~ 48470035 (-)
G1818059 NA other upstream 167324 48627364 ~ 48627846 (-)
G1818393 NA other upstream 665474 49125514 ~ 49126117 (-)
G1818417 NA other upstream 705711 49165751 ~ 49166367 (-)
G1818802 NA other upstream 1257592 49717632 ~ 49719378 (-)

Expression


Co-expression Network