XLOC_037312


Basic Information

Item Value
gene id XLOC_037312
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 36928055 ~ 36932532 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075173
CCTAACCAGACCATCAGTTTGCAGTCACTGCTGAGGTGTGATTGCCATTTCTCCACATGTCCCAGActaatctgcaaaagacaaaaacaagactaacagagctctaTATGCTGACTGATCTCCAGCAATAAACAAAgtgttctccagtgttcttctgatattctccactaatgctcttgtgagtctccttcttctgcCTGATGTGGTTCCATTACAGTACCTACCGTGTAAATTACAGCCACAGACAAGGCATCTATCtgacaatctatgcccaccaccacccttTTCCTCTTGGAAGAAAATCCATCTACGCCATCCATctctttttaaaggatatttctGATCATCAGTATCCAGTCATTGTTGAGGTCTGTAATTCCTATTTGTCTCCACGTGCTGcactccagtctgtaaaagacaaagacaggactaacagagctctacatgcttgatgagctccagcaatgcacaagatgttctccagtgttcttcaaTTAATCCCCACAAatgctcttgtgagtttccttcttctgccaGTTGTGTGTCCATTACTTGAACAAGAAACACCTGCCACAAACAAGACATCTACCTAACTATTTAAgtccaccaccacccccttcctcttggatggacatctattcattcatccacccatccattctgAAAATACCTAACCAGATCATCAGTTTGCAGTCACTGCTGAGGTGTGATTCCCATTTCTTCACATGTCTTAGACTAATCTGCAAAAGATAAAAACAAGAATAACAGACCTCTATATGCTGACTGATCTTCAGCAATAAACAAAGTGTTCTCCAGTGTTCTCCAGAAattctccactgatgctcttgtgagtctccttcttctgcCTGTTGTGGTTCCACTACCAATACCTACATTGTAAATTACAGTCACAGACAAGGCAtctatctaacaatctatgcccaccaccaccccttcctcttGAAAGGACATGCATCCATGCACCCATCCATCTCTTTTTGAAGGATATTCCTGATcatcagtgtccagtcattgTTGAGGTCTAAAATTCCTATTTGTCTCCATATGCTGcactccagtctgtaaaagacaaagacaggactaacagagctctacatacTTGATGAGCTACAGCAATGCACAGGATGTTCTCCAGTGTTCctcaaatacaaataataagatgctcttgtgagtttccttctttTGTCAGCTGTGTCCATTACTTGAACAAGAAACACCTGCCACAAACAAGACATTTAGCTAACTATCTAAGCTCACCACcttccccttcctcttggaagcacatctattcattcatccacccatccattcaggTAATACCTAACCAAACCATCAGTTTGTAGtcactgctgaagtgtgattcctatttctccacatgccccagaataatctgcaaaagacaaagCCAGGAATGACATAGCTCTACATGCTGATGATCTCTAGCTATAATCAAAGTGTTCTCCAGTGTTCTTTAGATATTCCTCACCGATGCTCCTGTGATTCTCCTTCTTCTACCTGCTCTGTGTCCATTACctacaatgtaaataacagccacagaTAAGGCATCTATCtgacaatctatgcccaccacgaCCCCCTTTCTCTTGAAAGGACATTCATCCATGCACCCATCCTTCTTCCTTTGAAGGATATTCCTGATcatcagtgtccagtcattgTTGAGGTCTGTAATTCATATTTTTCTCCATATGCTGcactccagtctgtaaaagacaaagataggactaacagagctctacatgcttgctgagCTTTGCTGAGCATTGC
>TCONS_00075174
CCTAACCAGACCATCAGTTTGCAGTCACTGCTGAGGTGTGATTGCCATTTCTCCACATGTCCCAGActaatctgcaaaagacaaaaacaagactaacagagctctaTATGCTGACTGATCTCCAGCAATAAACAAAgtgttctccagtgttcttctgatattctccactaatgctcttgtgagtctccttcttctgcCTGATGTGGTTCCATTACAGTACCTACCGTGTAAATTACAGCCACAGACAAGGCATCTATCtgacaatctatgcccaccaccacccttTTCCTCTTGGAAGAAAATCCATCTACGCCATCCATctctttttaaaggatatttctGATCATCAGTATCCAGTCATTGTTGAGGTCTGTAATTCCTATTTGTCTCCACGTGCTGcactccagtctgtaaaagacaaagacaggactaacagagctctacatgcttgatgagctccagcaatgcacaagatgttctccagtgttcttcaaTTAATCCCCACAAatgctcttgtgagtttccttcttctgccaGTTGTGTGTCCATTACTTGAACAAGAAACACCTGCCACAAACAAGACATCTACCTAACTATTTAAgtccaccaccacccccttcctcttggatggacatctattcattcatccacccatccattctgAAAATACCTAACCAGATCATCAGTTTGCAGTCACTGCTGAGGTGTGATTCCCATTTCTTCACATGTCTTAGACTAATCTGCAAAAGATAAAAACAAGAATAACAGACCTCTATATGCTGACTGATCTTCAGCAATAAACAAAGTGTTCTCCAGTGTTCTCCAGAAattctccactgatgctcttgtgagtctccttcttctgcCTGTTGTGGTTCCACTACCAATACCTACATTGTAAATTACAGTCACAGACAAGGCAtctatctaacaatctatgcccaccaccaccccttcctcttGAAAGGACATGCATCCATGCACCCATCCATCTCTTTTTGAAGGATATTCCTGATcatcagtgtccagtcattgTTGAGGTCTAAAATTCCTATTTGTCTCCATATGCTGcactccagtctgtaaaagacaaagacaggactaacagagctctacatacTTGATGAGCTACAGCAATGCACAGGATGTTCTCCAGTGTTCctcaaatacaaataataagatgctcttgtgagtttccttctttTGTCAGCTGTGTCCATTACTTGAACAAGAAACACCTGCCACAAACAAGACATTTAGCTAACTATCTAAGCTCACCACcttccccttcctcttggaagcacatctattcattcatccacccatccattcaggTAATACCTAACCAAACCATCAGTTTGTAGtcactgctgaagtgtgattcctatttctccacatgccccagaataatctgcaaaagacaaagCCAGGAATGACATAGCTCTACATGCTGATGATCTCTAGCTATAATCAAAGTGTTCTCCAGTGTTCTTTAGATATTCCTCACCGATGCTCCTGTGATTCTCCTTCTTCTACCTGCTCTGTGTCCATTACctacaatgtaaataacagccacagaTAAGGCATCTATCtgacaatctatgcccaccacgaCCCCCTTTCTCTTGAAAGGACATTCATCCATGCACCCATCCTTCTTCCTTTGAAGGATATTCCTGATcatcagtgtccagtcattgTTGAGGTCTGTAATTCATATTTTTCTCCATATGCTGcactccagtctgtaaaagacaaagataggactaacagagctctacatgcttgctgagCTTTGCTGAGCATTGC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075173 False 1809 lncRNA 0.42 2 36928055 36930192
TCONS_00075174 True 1809 lncRNA 0.42 2 36928055 36932532

Neighbor

gene id symbol gene type direction distance location
XLOC_037311 BX664716.2 coding upstream 130221 36794384 ~ 36797834 (+)
XLOC_037310 NA coding upstream 152541 36770664 ~ 36775514 (+)
XLOC_037309 lrp1bb coding upstream 233057 36314867 ~ 36694998 (+)
XLOC_037308 NA coding upstream 750634 36124753 ~ 36177421 (+)
XLOC_037307 NA coding upstream 825383 35987844 ~ 36102672 (+)
XLOC_037313 si:dkey-3d4.3 coding downstream 13808 36946340 ~ 36956667 (+)
XLOC_037314 inhbb coding downstream 34762 36967294 ~ 36974879 (+)
XLOC_037315 NA coding downstream 58631 36991163 ~ 36991851 (+)
XLOC_037316 gli2a coding downstream 209304 37141836 ~ 37297485 (+)
XLOC_037317 BX548071.1 coding downstream 248908 37181440 ~ 37181557 (+)
XLOC_037302 CU074387.1 non-coding upstream 1498739 35429202 ~ 35429316 (+)
XLOC_037320 BX322793.1 non-coding downstream 479338 37411870 ~ 37411986 (+)
XLOC_037321 NA non-coding downstream 542615 37475147 ~ 37492914 (+)
XLOC_037322 NA non-coding downstream 574427 37506959 ~ 37508273 (+)

Expression


Co-expression Network