Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818084 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48676508 ~ 48676734 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080228 | True | 227 | lncRNA | 0.41 | 1 | 48676508 | 48676734 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502188 | LOC106582504 | coding | downstream | 30587 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 456466 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 612055 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 704377 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 842254 | 47733219 ~ 47834254 (-) |
| LOC118943644 | NA | coding | upstream | 285478 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 793368 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1446154 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1783360 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1795013 | 50471747 ~ 50484670 (-) |
| G1818076 | NA | non-coding | downstream | 18477 | 48657786 ~ 48658031 (-) |
| G1818074 | NA | non-coding | downstream | 20901 | 48655323 ~ 48655607 (-) |
| G1818034 | NA | non-coding | downstream | 84237 | 48591411 ~ 48592271 (-) |
| G1818033 | NA | non-coding | downstream | 87402 | 48587700 ~ 48589106 (-) |
| G1818030 | NA | non-coding | downstream | 93538 | 48582562 ~ 48582970 (-) |
| G1818085 | NA | non-coding | upstream | 3184 | 48679918 ~ 48680166 (-) |
| G1818106 | NA | non-coding | upstream | 68764 | 48745498 ~ 48745793 (-) |
| G1818110 | NA | non-coding | upstream | 74760 | 48751494 ~ 48751785 (-) |
| G1818120 | NA | non-coding | upstream | 82621 | 48759355 ~ 48761267 (-) |
| G1818122 | NA | non-coding | upstream | 88330 | 48765064 ~ 48765359 (-) |
| G1818059 | NA | other | downstream | 48662 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 206473 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 216468 | 48459026 ~ 48460040 (-) |
| G1817668 | NA | other | downstream | 385012 | 48268787 ~ 48291496 (-) |
| G1818393 | NA | other | upstream | 448780 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 489017 | 49165751 ~ 49166367 (-) |
| G1818802 | NA | other | upstream | 1040898 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 1532740 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 1625067 | 50301801 ~ 50305038 (-) |
