XLOC_037314 (inhbb)


Basic Information

Item Value
gene id XLOC_037314
gene name inhbb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 36967294 ~ 36974879 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073425
GGACAACATCCCTCCTGAGGCTGAAGAAACGCGCAAGAACTCGCAACACTACATTACTAAAAGAAGAGGAGCACGAAACAACTCGAATTCGGTGGACAGACAAACGGTGAATCGTTCTCTTCAAGCAAGATTTTGTTTTTGACCACACTGAATTTTAAAGGAATAGCAATCGGTTTGTTTTGACTCTTCACACATCAGTTAGTCCTGTACCTTGATGATGAGGAGACATTTTCGCGCTTTTTAACTCGAGGACTGACATTTTCGCGACAAGATTTCGCTATTATCAATGCGTTTACCGGACGATACTATGAACTCTTTCTATGAACGTCTCACAAAAATGACCGCGAGCCTAATAATGAACGGACATCTGTCAAAGGAGGTTGCTGGAAGTACAACTCAGTCctgtttatagtttattttaactGTAGGAGTTCATGAACTGATTTGTTTGTTGTATGGACACGATATTTATGAAAATGAGCGTTTCCATCCTCTCTGTAACCTGTTTGATGGCTTGCCTGCTCTCGGTTCAGTGTAGTAGTCTGGGAGCGGAGACCGGCTCCCAGGAGTCTCAGTGTGTGTCTTGTGGACTCGGGCATCAGGAAGATTCGGGGAGAATGGACACAGACTTTCTGGAAGCGGTTAAAAGGCACATATTGAACCGACTGCAGATGAGAGAGAGACCAAATATCACTCATCCCATTCCCAAAGCCGCCATGGTAACGGCGCTGCGCAAACTTCACGCGGGTAAAGTTAGGGAGGACGGCAGGGTTGAGATCCCCAACTTAGATGGACACGCTGCCCACAACGAGGTGCAAGAAGAAACGTCGGAAATCATCAGTTTTGCCGAATCAGATGATGTAACTCCATCCAAGTCCAGCCTCTACTTTCTGATCTCCAACGAGGGGAATCAGAACCTCTACGTGTTGCAGGCAAATCTGTGGCTGTATTTTAAGCTGATGCCAGGTACTCTGGAGAAGGGCCTGCGGCGAAAGGTGACAGTGAGGGTGCACTCCTATGAGCCTGGTGGGCAGAACGTGCACTGGCCCATGATGGAGAAACGTGTTGAATTGAAACGTAGCGGCTGGCACACCTTCCCTGTGTCTGAGGCCATACGGGAAATGTTGGCTAAAGGAGGTCGCCGACAAGACCTCGACATCCACTGCGAGGGTTGCGAGGCCGCCAATGTTCTGCCCATCTTGGTGGACCCAAGTGACCCCTCTCACCGACCCTTCCTGGTAGTCCGGGCACAGCAGGCAGATGGAAAACACCGCATCCGAAAGCGAGGCTTGGAGTGTGACGGCAACAACGGAGGTTTGTGCTGCCGACAGCAGTTTTACATCGACTTCCGGCTCATTGGGTGGAACGACTGGATCATTGCGCCAGCAGGGTACTATGGGAACTACTGTGAGGGCAGCTGCCCTGCTTATATGGCAGGTGTTCCAGGCTCTGCCTCGTCATTTCACACAGCAGTGGTCAACCAGTACCGCATGAGAGGCATGAGTCCCGGATCTGTTAACTCCTGCTGCATACCCACTAAACTCAGCACCATGTCAATGCTCTACTTCGATGACGAGTACAACATCGTCAAACGTGACGTGCCTAACATGATCGTGGAGGAGTGCGGCTGTGCCTGAACAAAATCCATGTTAGGACAGCAGTGACAGTCATATTTATGGTCTTTCTGAACCACATGCATATAGATTGCGTTAATATTTGTGCACTCACAAAGTACAATCACACacgtctgtatgtgtgtgtgtgtgtgtgcatcaagCAGTAGATCATCAGACAGGTGGATATAAAGGCTAGGGATGATAAGGGAAAGGAAACACCAAATGGTTGAACTCTAGTTTGCCATTTCTAGACTTAAAAAAAATGGCTCAAACTTTCTAACAGCGAACTGGTGTCATGCTTTGACATGAGTACTTAGAGACTGTTGTACAAGCACTGACATATCTCAATGTCCCTCCTACTTCAGAACACCAGCACTTCCAACAGCTCATATAAGGCAATATGACAAATCATTCCAGCTGATGTAGAGATTTCTAAATCAGTGCGCATCATCCCAGTCCTTCTCAGAGGCTTTCCCACAGCAATGACTCCAGCTGTCTGCGCTATTGTCAAATAAATAGTGAGGCTTCAACCCAGACTGCAAGCACCTTTGGCCAAGATCATCTTGAAACTAAAACCACTTCCATCGTTCCACTTAACTTAACTGTGGCTGACTGCATAACAAGATCTTGAGGTCTAACCGGTACAGCGCAAAGTTCACCTGCACACTTCAGTGGCTGACAAACGCTTGCAGCGATGTGCGTTCCACAGAGCCTCTTTTACTCTGTCCAGCTGGTTTACAGGGAGTACAGCACTTGCGAAAACTCTCGAAATGCACAATTTAAAGCACTTGCATATTGCAAAGCCTTCAAAAGGGTACAACGAGGTGGACCTACCCTTGCCCATAGTCCTTTTAATATAAAGTGCCGCACGAACTATGCAATGTATAGTAATCCTGAACAATGTCAAACAAACTGAAATCTTCTTTCTGCTTGTCTTTAACTCTGTATCAATACTTGAAATGTGATCTTTCGCTTGCTTTCCAAAGCGGATGATTGTTACGATGTTTGCACTGAAAAGTTGCGGGATTagttaaaagacaaaaaaataaatctgccattgaaaatgttatttttgtagtaaaactgaatatttgtaaacaacaaaaaaaaaattaattgtaccAAAGAGGCCAATATTTTAGCTATTGTAATAAGGTGGCAAGGCCATtccaatatttgtaaaataattgttgATCCTTCTCAAGAGGCCTAATAATCAGGGTACAACATAATGGATTCCATTTATAGCTCTGTCTAATTTTTGTATGCCATGTACAGAAAACCGATGAAACACAATCTTTTCCTTGTCTTTaattttccagtcttctatttaATAAAAGTTATTTCTTAGCTGTTGTCATTTAGTTCAACGGATGTCATCTCTGTACagattatgtaaaataaaa

Function

symbol description
inhbb Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in fin; heart; ovary; and testis. Orthologous to human INHBB (inhibin subunit beta B).

GO:

id name namespace
GO:0060395 SMAD protein signal transduction biological_process
GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation biological_process
GO:0005576 extracellular region cellular_component
GO:0005615 extracellular space cellular_component
GO:0005125 cytokine activity molecular_function
GO:0005179 hormone activity molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
ko04350 TGF-beta signaling pathway
ko04060 Cytokine-cytokine receptor interaction
ko04550 Signaling pathways regulating pluripotency of stem cells
ko04052 Cytokines and growth factors

ZFIN:

id description
ZDB-GENE-990415-2 Predicted to enable cytokine activity. Predicted to be involved in SMAD protein signal transduction and positive regulation of pathway-restricted SMAD protein phosphorylation. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in fin; heart; ovary; and testis. Orthologous to human INHBB (inhibin subunit beta B).

Ensembl:

ensembl_id ENSDARG00000040777

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073425 True 3022 mRNA 0.45 2 36967294 36974879

Neighbor

gene id symbol gene type direction distance location
XLOC_037313 si:dkey-3d4.3 coding upstream 10627 36946340 ~ 36956667 (+)
XLOC_037312 NA coding upstream 34762 36928055 ~ 36932532 (+)
XLOC_037311 BX664716.2 coding upstream 169460 36794384 ~ 36797834 (+)
XLOC_037310 NA coding upstream 191780 36770664 ~ 36775514 (+)
XLOC_037309 lrp1bb coding upstream 272296 36314867 ~ 36694998 (+)
XLOC_037315 NA coding downstream 16284 36991163 ~ 36991851 (+)
XLOC_037316 gli2a coding downstream 166957 37141836 ~ 37297485 (+)
XLOC_037317 BX548071.1 coding downstream 206561 37181440 ~ 37181557 (+)
XLOC_037318 slc15a2 coding downstream 345343 37320222 ~ 37339656 (+)
XLOC_037319 slc49a4 coding downstream 392094 37366973 ~ 37453128 (+)
XLOC_037308 NA non-coding upstream 789873 36124753 ~ 36177421 (+)
XLOC_037307 NA non-coding upstream 864622 35987844 ~ 36102672 (+)
XLOC_037320 BX322793.1 non-coding downstream 436991 37411870 ~ 37411986 (+)
XLOC_037321 NA non-coding downstream 500268 37475147 ~ 37492914 (+)
XLOC_037322 NA non-coding downstream 532080 37506959 ~ 37508273 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G53127 NA non-coding CI01000009 null 4763368 ~ 4771085 (-)
bowfin (Amia calva) G48433 NA non-coding CM030125.1 CM030125.1 49618277 ~ 49618955 (-)