XLOC_037315


Basic Information

Item Value
gene id XLOC_037315
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 36991163 ~ 36991851 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075175
GTTAAGCTCATGCTGCTCTAATGTTTGTGAGTGTGAAAGGAGCCAGACATGCTATGTACCTGATGCAATGCTATAATAAGGGTGGAGTAAGCCTTTGGGATATGTGGATTCAGcgcttttctagacactcaagtgctttacacattgggcagaatctcctcatccaccaccagtgtgcagcatccacctggatgacgtgatggcagccatattgcgccagaccacacacaccacacaccagctgattggtggagaggaaacagagtgatgaagccaattatggggATGTTGTgggcatgatggacagaggccagtgggcaaatttgaccAGGATGCCGGTGTGGTGAGAAATCTGGTCCCCCCTGCAATCGAGTCCGCTTAGGACCCCAATGGATTGTCTGCGTTAAATGCCTGATCAAAAACTATTGTACTTCTCCACATTACAATCATATTTGGTGCTTTTTATACTCTAATCTCAGTCTTGCCATTGTAACAGCCCTAGCC

Function

GO:

id name namespace
GO:1990709 presynaptic active zone organization biological_process
GO:1904071 presynaptic active zone assembly biological_process
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component
GO:0098982 GABA-ergic synapse cellular_component
GO:0016020 membrane cellular_component
GO:0098882 structural constituent of presynaptic active zone molecular_function
GO:0098918 structural constituent of synapse molecular_function
GO:0099181 structural constituent of presynapse molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075175 True 504 lncRNA 0.48 2 36991163 36991851

Neighbor

gene id symbol gene type direction distance location
XLOC_037314 inhbb coding upstream 16284 36967294 ~ 36974879 (+)
XLOC_037313 si:dkey-3d4.3 coding upstream 34496 36946340 ~ 36956667 (+)
XLOC_037312 NA coding upstream 58631 36928055 ~ 36932532 (+)
XLOC_037311 BX664716.2 coding upstream 193329 36794384 ~ 36797834 (+)
XLOC_037310 NA coding upstream 215649 36770664 ~ 36775514 (+)
XLOC_037316 gli2a coding downstream 149985 37141836 ~ 37297485 (+)
XLOC_037317 BX548071.1 coding downstream 189589 37181440 ~ 37181557 (+)
XLOC_037318 slc15a2 coding downstream 328371 37320222 ~ 37339656 (+)
XLOC_037319 slc49a4 coding downstream 375122 37366973 ~ 37453128 (+)
XLOC_037320 BX322793.1 coding downstream 420019 37411870 ~ 37411986 (+)
XLOC_037308 NA non-coding upstream 813742 36124753 ~ 36177421 (+)
XLOC_037307 NA non-coding upstream 888491 35987844 ~ 36102672 (+)
XLOC_037321 NA non-coding downstream 483296 37475147 ~ 37492914 (+)
XLOC_037322 NA non-coding downstream 515108 37506959 ~ 37508273 (+)
XLOC_037325 CU896658.1 non-coding downstream 885583 37877434 ~ 37877550 (+)

Expression


Co-expression Network