Gene
RNA
| Item | Value |
|---|---|
| gene id | G1818232 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 48894477 ~ 48894916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106592179 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2080418 | True | 440 | lncRNA | 0.42 | 1 | 48894477 | 48894916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502188 | LOC106582504 | coding | downstream | 248556 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 674435 | 48139761 ~ 48220042 (-) |
| LOC110501953 | ihh | coding | downstream | 830024 | 48057851 ~ 48064453 (-) |
| tmem198a | LOC106582514 | coding | downstream | 922346 | 47897057 ~ 47972131 (-) |
| ptprna | LOC106582506 | coding | downstream | 1060223 | 47733219 ~ 47834254 (-) |
| LOC118943644 | NA | coding | upstream | 67296 | 48962212 ~ 48964633 (-) |
| LOC118943599 | NA | coding | upstream | 575186 | 49470102 ~ 49480960 (-) |
| prkag3b | LOC106592041 | coding | upstream | 1227972 | 50122888 ~ 50243945 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 1565178 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 1576831 | 50471747 ~ 50484670 (-) |
| G1818227 | NA | non-coding | downstream | 5226 | 48889003 ~ 48889251 (-) |
| G1818218 | NA | non-coding | downstream | 11291 | 48882960 ~ 48883186 (-) |
| G1818197 | NA | non-coding | downstream | 41667 | 48852570 ~ 48852810 (-) |
| G1818144 | NA | non-coding | downstream | 112971 | 48781229 ~ 48781506 (-) |
| G1818136 | NA | non-coding | downstream | 115026 | 48773696 ~ 48779451 (-) |
| G1818252 | NA | non-coding | upstream | 31278 | 48926194 ~ 48931697 (-) |
| G1818255 | NA | non-coding | upstream | 39225 | 48934141 ~ 48935017 (-) |
| G1818259 | NA | non-coding | upstream | 56888 | 48951804 ~ 48952171 (-) |
| G1818270 | NA | non-coding | upstream | 64997 | 48959913 ~ 48960113 (-) |
| G1818292 | NA | non-coding | upstream | 91355 | 48986271 ~ 48987447 (-) |
| G1818059 | NA | other | downstream | 266631 | 48627364 ~ 48627846 (-) |
| G1817968 | NA | other | downstream | 424442 | 48469598 ~ 48470035 (-) |
| G1817836 | NA | other | downstream | 434437 | 48459026 ~ 48460040 (-) |
| G1817668 | NA | other | downstream | 602981 | 48268787 ~ 48291496 (-) |
| G1818393 | NA | other | upstream | 230598 | 49125514 ~ 49126117 (-) |
| G1818417 | NA | other | upstream | 270835 | 49165751 ~ 49166367 (-) |
| G1818802 | NA | other | upstream | 822716 | 49717632 ~ 49719378 (-) |
| G1819189 | NA | other | upstream | 1314558 | 50137937 ~ 50219233 (-) |
| G1819250 | NA | other | upstream | 1406885 | 50301801 ~ 50305038 (-) |
