XLOC_037321


Basic Information

Item Value
gene id XLOC_037321
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 37475147 ~ 37492914 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075176
ccctatttcatgtataatatgggctctttaatgtacaaaataaacctgatttaacgtccgcAACCCGGGATTGAAgtgtcttttataattgtactgacatgcagctgtgagAATAAAGACGAAAAAATCGCTGTAATTCGttaaaaacatgcactgttttaacaTATTAAACTTGTAAAGCTCATtcctgatcacatttgatgatgattgatgatcacagggAGCTCAACAGATCATTTAATCCCCGTTtctttgtgcacgtcctgtcttaTTGATACGATTATATGCGCCATTACGGAGACATAttaatacatggctgtcaatcaaGTCAGTGGGCGTGGAAACCGCACTCCTGTCACGTTACGGTCAATCTCAAAATGTGAGaggtttggatcctattttaatgtcagaaaaaaaaaattattatgtttctattactccagtatgactgtggacacactatacacagttctgttcaaacagcttccaaaagatgattttcatcataggtgccctttaagacgctaacatttttctgtaaaacttttttaaaactagaAAGATTCATTCCCATTGATTTCATCCACGTGAACCAAAACCattttctccttttgtgttccacagaagaaagccTGGTTTGAAACTTCCCATGGGTGAGCAGATAATTGCAGAATTTTGGGCGAACTACTCCTTTGAATGAACCAACGGCAAAACTGTTGAAACTAGGTTTATCGATCATCCCAAAATCCATTCAAAAAAGACACTTTTGCCGGTTCCTATTGACTTTCATTCATGCAAAACTGCAGAGCGGCTTCTTTAAAAACGAGCAGTGAATAAACTCCACACACTTGCTGGCTACATTTTAGACCAGCACTGCCAACTTCATTATTTATGCCTTGCATGTTTTGAGTGAAAAGGGCACACACACTGTATCATGTCAAAGACCAACATCCATTTTGTCTCTTAGGAGGGATTTTGTGAAGGGAAAAAGGTGCACAAGTGTTGTCAGCATTTAGTTCCAATTTCCCTCAGCCTGCCAAGCAAATCCCAACACGTCCAAATGGTAGCGTATGATAGCCGACCTGACATTGGATTGAAAAACATGACAATTTGAAAACGCTTACCTTTCACTCCCGCCAGGGTGACCTAGATTGATGCAGTCTGGGAGTAGATGGGAGAAGGACGAAACGGCTCAGGGTCAAAGCAGTTGAGGTGGTTGGGAGTGGTGGGATGGATGATGGCAGACTCCTGCGAGGGCTTGTGGAACCGCTGACAGTAAACATACACCAGGAAAGACAGCAGACCGGCACCAAGAAAACACGACACACCTGTCGCTATCAGGTGGAGCAGAGTGAACCCTGGGGGAACAAGAGAAAGCAACATTACCACAACCACTTGTCTGCAAACAACTGTAATATGTTG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075176 True 1422 lncRNA 0.41 2 37475147 37492914

Neighbor

gene id symbol gene type direction distance location
XLOC_037319 slc49a4 coding upstream 22019 37366973 ~ 37453128 (+)
XLOC_037320 BX322793.1 coding upstream 63161 37411870 ~ 37411986 (+)
XLOC_037318 slc15a2 coding upstream 135491 37320222 ~ 37339656 (+)
XLOC_037316 gli2a coding upstream 177662 37141836 ~ 37297485 (+)
XLOC_037317 BX548071.1 coding upstream 293590 37181440 ~ 37181557 (+)
XLOC_037322 NA coding downstream 14045 37506959 ~ 37508273 (+)
XLOC_037323 pdia5 coding downstream 261931 37754845 ~ 37840350 (+)
XLOC_037324 sec22a coding downstream 357446 37850360 ~ 37862563 (+)
XLOC_037325 CU896658.1 coding downstream 384520 37877434 ~ 37877550 (+)
XLOC_037326 NA coding downstream 528976 38021890 ~ 38024061 (+)
XLOC_037315 NA non-coding upstream 483296 36991163 ~ 36991851 (+)
XLOC_037312 NA non-coding upstream 542615 36928055 ~ 36932532 (+)
XLOC_037311 BX664716.2 non-coding upstream 677313 36794384 ~ 36797834 (+)
XLOC_037330 BX548038.1 non-coding downstream 667532 38160446 ~ 38160572 (+)
XLOC_037331 BX548038.2 non-coding downstream 668349 38161263 ~ 38161389 (+)

Expression


Co-expression Network