G1819189


Basic Information

Item Value
gene id G1819189
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50137937 ~ 50219233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2081612
cagcggtctctgaccagagtagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtagaatgggtggcagagcggtctctgaccagactagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtagaatgggcggtctctgaccagagtagaggtagaatgggcggtctctgaccagagtagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtaaaatgggcggtctctgaccagagtagaggttgaatgggcagtgcagcggtctctgaccagagtagaggtaga
>TU2081641
gtgcagcggtctctgaccagagtagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtagaatggatggtggagcggtctctgaccagagtagaggtagaatgggcagtgcagcggtctctgaccaaagtagagatagaatgggcggtgcagcggtctctgaccagagtagaggtagaatgggcggtggagcggtctctgaccagagtagaggtagaatgggcggtggagcggtctctgaccagagtagaggtagaatgggcggtctctgaccagagtagaggtagaatgggcggtctctgaccagagtagaggtagaatgggcggtctctgaccagactagaggtagaatgggcggtctctgaccagactagcgGTAGAATGgacggtgcagcggtctctgaccagagtagaggtagaatggacggtgcagcggtctctgaccagagtagaggtagaatgggcggtctctgaccagagtagaggtagaatgggc
>TU2081603
gtagaatgggcggtctctgaccagagtagaggtagaatgggcggtctctgaccagactatatgtagaatgggcggtgcagctgtctctgaccagagtagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtcgaatgggcggtctctgaccagagtagaggtcgaatgggcggtgcagcggtctctgaccagactagaggtagaatgggcggtgcagcgatctctgaccagactagaggtagaatgggcggtgcagcggtctctgaccagactagaggtagaatgggcggtgcagcggtctctgaccagactagaggtagaatgggcggtgcagcggtctctgaccagactataggtagaatgggcggtgcagcggtctctgaccagactagaggtagaatgggcggtgcagcggtctctgaccagagtagaggtagaatgggcagtgcagcggtctctgaccagactagag

Function

NR:

description
hypothetical protein EH28_10289

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2081612 False 356 lncRNA 0.57 3 50137937 50169261
TU2081641 False 505 lncRNA 0.56 4 50160777 50219233
TU2081603 True 483 TUCP 0.57 2 50209474 50213886

Neighbor

gene id symbol gene type direction distance location
LOC118943599 NA coding downstream 656977 49470102 ~ 49480960 (-)
LOC118943644 NA coding downstream 1173304 48962212 ~ 48964633 (-)
LOC110502188 LOC106582504 coding downstream 1492016 48505445 ~ 48645921 (-)
LOC110501956 itgav coding downstream 1917895 48139761 ~ 48220042 (-)
LOC110501953 ihh coding downstream 2073484 48057851 ~ 48064453 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 240861 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 252514 50471747 ~ 50484670 (-)
cd28 LOC100136275 coding upstream 275834 50495067 ~ 50496991 (-)
LOC118943619 NA coding upstream 302771 50521227 ~ 50533748 (-)
tmem237a LOC105009128 coding upstream 501464 50720697 ~ 50753131 (-)
G1819185 NA non-coding downstream 27966 50109770 ~ 50109971 (-)
G1819148 NA non-coding downstream 134638 50002783 ~ 50003299 (-)
G1819125 NA non-coding downstream 185399 49951604 ~ 49952538 (-)
G1819065 NA non-coding downstream 329913 49807774 ~ 49808024 (-)
G1819055 NA non-coding downstream 350989 49785942 ~ 49786948 (-)
G1819252 NA non-coding upstream 90028 50309261 ~ 50309620 (-)
G1819255 NA non-coding upstream 107800 50327033 ~ 50327721 (-)
G1819266 NA non-coding upstream 155861 50375094 ~ 50379569 (-)
G1819274 NA non-coding upstream 169074 50388307 ~ 50388550 (-)
G1819843 NA non-coding upstream 179249 50398482 ~ 50400690 (-)
G1818802 NA other downstream 418559 49717632 ~ 49719378 (-)
G1818417 NA other downstream 971570 49165751 ~ 49166367 (-)
G1818393 NA other downstream 1011820 49125514 ~ 49126117 (-)
G1818059 NA other downstream 1510091 48627364 ~ 48627846 (-)
G1817968 NA other downstream 1667902 48469598 ~ 48470035 (-)
G1819250 NA other upstream 82568 50301801 ~ 50305038 (-)
G1820012 NA other upstream 677339 50896572 ~ 50897153 (-)
G1820053 LOC106582548 other upstream 804205 51023438 ~ 51026181 (-)

Expression


Co-expression Network