Gene
RNA
| Item | Value |
|---|---|
| gene id | G1819266 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 50375094 ~ 50379569 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2081790 | False | 611 | lncRNA | 0.53 | 3 | 50375094 | 50378743 |
| TU2081786 | True | 237 | lncRNA | 0.49 | 2 | 50376006 | 50379569 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prkag3b | LOC106592041 | coding | downstream | 131149 | 50122888 ~ 50243945 (-) |
| LOC118943599 | NA | coding | downstream | 894134 | 49470102 ~ 49480960 (-) |
| LOC118943644 | NA | coding | downstream | 1410461 | 48962212 ~ 48964633 (-) |
| LOC110502188 | LOC106582504 | coding | downstream | 1729173 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 2155052 | 48139761 ~ 48220042 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 80525 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 92178 | 50471747 ~ 50484670 (-) |
| cd28 | LOC100136275 | coding | upstream | 115498 | 50495067 ~ 50496991 (-) |
| LOC118943619 | NA | coding | upstream | 142435 | 50521227 ~ 50533748 (-) |
| tmem237a | LOC105009128 | coding | upstream | 341128 | 50720697 ~ 50753131 (-) |
| G1819255 | NA | non-coding | downstream | 47373 | 50327033 ~ 50327721 (-) |
| G1819252 | NA | non-coding | downstream | 65474 | 50309261 ~ 50309620 (-) |
| G1819189 | NA | non-coding | downstream | 155861 | 50137937 ~ 50219233 (-) |
| G1819185 | NA | non-coding | downstream | 265123 | 50109770 ~ 50109971 (-) |
| G1819148 | NA | non-coding | downstream | 371795 | 50002783 ~ 50003299 (-) |
| G1819274 | NA | non-coding | upstream | 8738 | 50388307 ~ 50388550 (-) |
| G1819843 | NA | non-coding | upstream | 18913 | 50398482 ~ 50400690 (-) |
| G1819844 | NA | non-coding | upstream | 21194 | 50400763 ~ 50401263 (-) |
| G1819866 | NA | non-coding | upstream | 57407 | 50436976 ~ 50437417 (-) |
| G1819250 | NA | other | downstream | 70056 | 50301801 ~ 50305038 (-) |
| G1818802 | NA | other | downstream | 655716 | 49717632 ~ 49719378 (-) |
| G1818417 | NA | other | downstream | 1208727 | 49165751 ~ 49166367 (-) |
| G1818393 | NA | other | downstream | 1248977 | 49125514 ~ 49126117 (-) |
| G1820012 | NA | other | upstream | 517003 | 50896572 ~ 50897153 (-) |
| G1820053 | LOC106582548 | other | upstream | 643869 | 51023438 ~ 51026181 (-) |
| carf | LOC106582551 | other | upstream | 703420 | 51059254 ~ 51085922 (-) |
