G1819843


Basic Information

Item Value
gene id G1819843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50398482 ~ 50400690 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2082549
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>TU2082550
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Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2082549 False 667 lncRNA 0.33 2 50398482 50400690
TU2082550 True 604 lncRNA 0.31 3 50399679 50400690

Neighbor

gene id symbol gene type direction distance location
prkag3b LOC106592041 coding downstream 154537 50122888 ~ 50243945 (-)
LOC118943599 NA coding downstream 917522 49470102 ~ 49480960 (-)
LOC118943644 NA coding downstream 1433849 48962212 ~ 48964633 (-)
LOC110502188 LOC106582504 coding downstream 1752561 48505445 ~ 48645921 (-)
LOC110501956 itgav coding downstream 2178440 48139761 ~ 48220042 (-)
si:ch211-67e16.4 LOC106582542 coding upstream 59404 50460094 ~ 50465680 (-)
si:ch211-67e16.3 LOC106582540 coding upstream 71057 50471747 ~ 50484670 (-)
cd28 LOC100136275 coding upstream 94377 50495067 ~ 50496991 (-)
LOC118943619 NA coding upstream 121314 50521227 ~ 50533748 (-)
tmem237a LOC105009128 coding upstream 320007 50720697 ~ 50753131 (-)
G1819274 NA non-coding downstream 9932 50388307 ~ 50388550 (-)
G1819266 NA non-coding downstream 18913 50375094 ~ 50379569 (-)
G1819255 NA non-coding downstream 70761 50327033 ~ 50327721 (-)
G1819252 NA non-coding downstream 88862 50309261 ~ 50309620 (-)
G1819189 NA non-coding downstream 179249 50137937 ~ 50219233 (-)
G1819844 NA non-coding upstream 73 50400763 ~ 50401263 (-)
G1819866 NA non-coding upstream 36286 50436976 ~ 50437417 (-)
G1819893 NA non-coding upstream 99081 50499771 ~ 50503641 (-)
G1819250 NA other downstream 93444 50301801 ~ 50305038 (-)
G1818802 NA other downstream 679104 49717632 ~ 49719378 (-)
G1818417 NA other downstream 1232115 49165751 ~ 49166367 (-)
G1818393 NA other downstream 1272365 49125514 ~ 49126117 (-)
G1820012 NA other upstream 495882 50896572 ~ 50897153 (-)
G1820053 LOC106582548 other upstream 622748 51023438 ~ 51026181 (-)
carf LOC106582551 other upstream 682299 51059254 ~ 51085922 (-)

Expression


Co-expression Network