Gene
RNA
| Item | Value |
|---|---|
| gene id | G1819866 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 50436976 ~ 50437417 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: fer-1-like protein 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2082576 | True | 274 | lncRNA | 0.39 | 2 | 50436976 | 50437417 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prkag3b | LOC106592041 | coding | downstream | 193031 | 50122888 ~ 50243945 (-) |
| LOC118943599 | NA | coding | downstream | 956016 | 49470102 ~ 49480960 (-) |
| LOC118943644 | NA | coding | downstream | 1472343 | 48962212 ~ 48964633 (-) |
| LOC110502188 | LOC106582504 | coding | downstream | 1791055 | 48505445 ~ 48645921 (-) |
| LOC110501956 | itgav | coding | downstream | 2216934 | 48139761 ~ 48220042 (-) |
| si:ch211-67e16.4 | LOC106582542 | coding | upstream | 22677 | 50460094 ~ 50465680 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | upstream | 34330 | 50471747 ~ 50484670 (-) |
| cd28 | LOC100136275 | coding | upstream | 57650 | 50495067 ~ 50496991 (-) |
| LOC118943619 | NA | coding | upstream | 84587 | 50521227 ~ 50533748 (-) |
| tmem237a | LOC105009128 | coding | upstream | 283280 | 50720697 ~ 50753131 (-) |
| G1819844 | NA | non-coding | downstream | 35713 | 50400763 ~ 50401263 (-) |
| G1819843 | NA | non-coding | downstream | 36286 | 50398482 ~ 50400690 (-) |
| G1819274 | NA | non-coding | downstream | 48426 | 50388307 ~ 50388550 (-) |
| G1819266 | NA | non-coding | downstream | 57407 | 50375094 ~ 50379569 (-) |
| G1819255 | NA | non-coding | downstream | 109255 | 50327033 ~ 50327721 (-) |
| G1819893 | NA | non-coding | upstream | 62354 | 50499771 ~ 50503641 (-) |
| G1819894 | NA | non-coding | upstream | 70100 | 50507517 ~ 50509978 (-) |
| G1819250 | NA | other | downstream | 131938 | 50301801 ~ 50305038 (-) |
| G1819189 | NA | other | downstream | 223090 | 50137937 ~ 50219233 (-) |
| G1818802 | NA | other | downstream | 717598 | 49717632 ~ 49719378 (-) |
| G1818417 | NA | other | downstream | 1270609 | 49165751 ~ 49166367 (-) |
| G1818393 | NA | other | downstream | 1310859 | 49125514 ~ 49126117 (-) |
| G1820012 | NA | other | upstream | 459155 | 50896572 ~ 50897153 (-) |
| G1820053 | LOC106582548 | other | upstream | 586021 | 51023438 ~ 51026181 (-) |
| carf | LOC106582551 | other | upstream | 645572 | 51059254 ~ 51085922 (-) |
