G1819894


Basic Information

Item Value
gene id G1819894
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50507517 ~ 50509978 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2082620
ATTATCTTAGTCATATTAACTTCCCATTATCCCTAGTCATTATcccagtcatattagcaacccattaTTCCAGTCATATTAACCCAttatcccagtcatattaacaacccattatCTTTGTCATATTAACTACCCAttatcccagtcatattaacaacccattatCCCAGTCATTATCcaagtcatattaacaacccattatCCCAGTCAttatcccagtcatattaacaacccattatCCCAGTCATTATCCAAGTTATTATCCCAGTCACATTAACAACCCATTATTCCAGTCACATTAACAACCCATTATCCAGGTCATATAACAACCCATTATCCCaatcatattaacaacccattatCCCAGTCATTATCCATGGTcattatcctagtcatattaacaacccatgatcccagtcatattaacaacccattatCCCAGTCAttatcccagtcatattaacaacccattatCCTAGTCATTATCCAAGTCATTATCCCAGTCACATTAACAACCCAttatcccagtcatattaacaacccattatTCCAGTCACATTAATAACCCATTATCCAAGTCatattaacaacccattatcccagtcatattaacaacccattatCCCAGTCACATTAACAACCCATTATCCCAGTCAttatcccagtcatattaacaacccattatCCAGGTCATATAACAACCCATTATCCCaatcatattaacaacccattatcccagtcattatcccaatcatattaacaacccattatCCCAGTCAttatcccagtcatattaacaacctattatcccagtcatattaacaacccattatcccagtcatattaacaacccattatCTTTGTCATATTAACTATCCATTATCCCAGTCATTATCCCAGTCGTATTAACAACCCATTATCCTAGTCATTATCcaagtcatattaacaacccattatCCCAGTCATTATcccagtcatattagcaacccattaTTCCAGTCATATTAACCCAttatcccagtcatattaacaacccattatcccagtcatattaacaacccattatcccagtcatattaacaacccattttcccagtcatattatcatattaacaacccattatCCCAGTCATGTTAACAACCCAttatcccagtcatattaacaacccattaccccagtcatattaacaacccattatcccagtcatattaacaacccattatcccagtcatattaacaacccattaccccagtcatattaacccattatcccagtcatattaacaacccattatcccagtcatattaacaacccattacTCCAGTCATAGTAACAACCCATTATCCCTGTCAttatcccagtcatattaacaacccattatCTCAGTCATATTAACTACCCATTATCCCAGTCATTATCCCTGGTCATTATCCCAGTCATTAACAACCCAGtatcccagtcatattaacatCCCATTATCCCAGTCAttatcccagtcatattaacaacccatcatCCCAGTCAttatcccagtcatattaacaacccattatCCCAGTCAttatcccagtcatattaacGACCCATGATAGTCTTTGCATCTTCACGTCTCCCCCTTTCAACATGAATCTGCTCGCCATGTGCAGTTGTGCATTTTAGAACCGTGTCTTCCTGCTAACTGCATTTAGTAACATTCCCTCATAGGTCTTCCACTGTGAGCACACTGCTGCTGATCATCATGTTTAAACTAAACATTCTGGTCTGTTCCATCAACCTTACACAGCgtgaacctccactacactactttgatactgaacatgggatcatcatcatcatcatcactgcggtatcagaagatcccactagaggtctgttccatcaaccttacacagcgtgaacctccactacactactttgatactgaaCATGGGATCATCATGTACTTCACTGTGGTATCAGAAGatcccactagaggtctgttccatcaaccttacacagcgtgaacctccactacactactttgatactgaacatgggatcatcatcatcatcactgcggtatcagaagatcccactagaggtctgttccatcaaccttacacagcgtgaacctccactacactactttgatactgaaCATGGGATCATCATGTACTTCACTGCGGTATCAGAAGatcccactagaggtctgttccatcaaccttatacagcgtgaacctccactacactactttgatactgaacatgggatcatcatcatcatcactgcggtatcagaagatcccactagaggtctgttccatcaaccttacacagcgtgaacctccactacactactttgatactgaaCATGGGATCATCATGTACTTCACTGCGGTATCAGAAGatcccactagaggtctgttccatcaaccttacacagcgtgaacctccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2082620 True 2437 lncRNA 0.39 2 50507517 50509978

Neighbor

gene id symbol gene type direction distance location
cd28 LOC100136275 coding downstream 10663 50495067 ~ 50496991 (-)
si:ch211-67e16.3 LOC106582540 coding downstream 22847 50471747 ~ 50484670 (-)
si:ch211-67e16.4 LOC106582542 coding downstream 41837 50460094 ~ 50465680 (-)
prkag3b LOC106592041 coding downstream 263572 50122888 ~ 50243945 (-)
LOC118943599 NA coding downstream 1026557 49470102 ~ 49480960 (-)
LOC118943619 NA coding upstream 12026 50521227 ~ 50533748 (-)
tmem237a LOC105009128 coding upstream 210719 50720697 ~ 50753131 (-)
LOC110502197 LOC106582575 coding upstream 293673 50803651 ~ 50853194 (-)
als2a NA coding upstream 362477 50872455 ~ 50960735 (-)
LOC118943621 NA coding upstream 527486 51037464 ~ 51041332 (-)
G1819893 NA non-coding downstream 3876 50499771 ~ 50503641 (-)
G1819866 NA non-coding downstream 70100 50436976 ~ 50437417 (-)
G1819844 NA non-coding downstream 106254 50400763 ~ 50401263 (-)
G1819911 NA non-coding upstream 60875 50570853 ~ 50572801 (-)
G1819975 NA non-coding upstream 247650 50757628 ~ 50758387 (-)
G1819976 NA non-coding upstream 251246 50761224 ~ 50798171 (-)
G1819981 NA non-coding upstream 274992 50784970 ~ 50788056 (-)
G1819250 NA other downstream 202479 50301801 ~ 50305038 (-)
G1819189 NA other downstream 293631 50137937 ~ 50219233 (-)
G1818802 NA other downstream 788139 49717632 ~ 49719378 (-)
G1820012 NA other upstream 386594 50896572 ~ 50897153 (-)
G1820053 LOC106582548 other upstream 513460 51023438 ~ 51026181 (-)
carf LOC106582551 other upstream 573011 51059254 ~ 51085922 (-)
G1820212 NA other upstream 916425 51426403 ~ 51427042 (-)
LOC110501977 LOC106562996 other upstream 991880 51501853 ~ 51504398 (-)

Expression


Co-expression Network