Gene
RNA
| Item | Value |
|---|---|
| gene id | G1820008 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048586.1 |
| NCBI id | CM023240.2 |
| chromosome length | 52474311 |
| location | 50881406 ~ 50882244 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2082801 | True | 545 | lncRNA | 0.33 | 2 | 50881406 | 50882244 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502197 | LOC106582575 | coding | downstream | 28212 | 50803651 ~ 50853194 (-) |
| tmem237a | LOC105009128 | coding | downstream | 128275 | 50720697 ~ 50753131 (-) |
| LOC118943619 | NA | coding | downstream | 347658 | 50521227 ~ 50533748 (-) |
| cd28 | LOC100136275 | coding | downstream | 384552 | 50495067 ~ 50496991 (-) |
| si:ch211-67e16.3 | LOC106582540 | coding | downstream | 396736 | 50471747 ~ 50484670 (-) |
| LOC118943621 | NA | coding | upstream | 155220 | 51037464 ~ 51041332 (-) |
| sumo-1 | sumo-1 | coding | upstream | 159474 | 51041718 ~ 51052960 (-) |
| LOC118943622 | NA | coding | upstream | 172720 | 51054964 ~ 51057512 (-) |
| carf | LOC106582551 | coding | upstream | 177010 | 51059254 ~ 51085922 (-) |
| LOC118943624 | NA | coding | upstream | 179412 | 51061656 ~ 51063049 (-) |
| G1819985 | NA | non-coding | downstream | 11525 | 50861421 ~ 50869881 (-) |
| G1819999 | NA | non-coding | downstream | 36354 | 50844608 ~ 50845052 (-) |
| G1819998 | NA | non-coding | downstream | 52919 | 50827559 ~ 50828487 (-) |
| G1819993 | NA | non-coding | downstream | 59271 | 50820710 ~ 50822135 (-) |
| G1819986 | NA | non-coding | downstream | 66565 | 50814485 ~ 50814841 (-) |
| G1820011 | NA | non-coding | upstream | 9035 | 50891279 ~ 50891640 (-) |
| G1820019 | NA | non-coding | upstream | 37324 | 50919568 ~ 50922644 (-) |
| G1820033 | NA | non-coding | upstream | 85160 | 50967404 ~ 50967865 (-) |
| G1820075 | NA | non-coding | upstream | 184583 | 51066827 ~ 51070429 (-) |
| si:ch211-67e16.4 | LOC106582542 | other | downstream | 417644 | 50460094 ~ 50465680 (-) |
| G1819250 | NA | other | downstream | 576368 | 50301801 ~ 50305038 (-) |
| G1819189 | NA | other | downstream | 667520 | 50137937 ~ 50219233 (-) |
| G1818802 | NA | other | downstream | 1162028 | 49717632 ~ 49719378 (-) |
| G1820012 | NA | other | upstream | 14328 | 50896572 ~ 50897153 (-) |
| G1820053 | LOC106582548 | other | upstream | 141194 | 51023438 ~ 51026181 (-) |
| G1820212 | NA | other | upstream | 544159 | 51426403 ~ 51427042 (-) |
| LOC110501977 | LOC106562996 | other | upstream | 619614 | 51501853 ~ 51504398 (-) |
