G1820019


Basic Information

Item Value
gene id G1820019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048586.1
NCBI id CM023240.2
chromosome length 52474311
location 50919568 ~ 50922644 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2082816
GAACGGACTGGTGACTGGAGGAACGGACTGGTGACTGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACCGACTGGTGATCGGAGGAACCGACTGGTGACCGGAGGAACCGACTGGTGACCGGAGGAACCGACTGGTGACGGGACTGGTGACTGGAGGAACGGACTGGTGACTGGAGGAACGGACTGGTGACTGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGACCGGAGGAACGGACTGGTGATCGGACTGGTGATCGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTTGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATTGGACTGGTGATCGGACTGGTGAACGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGAACGGAGGAACCGACTGGTGATCGGAGGAACGGACTGGTGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAAGGGACTGGTGAACGGACTGGTGATCGGAGGAACGGACTGGTAAACGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGAACGGACTGGTGAACGGAGGAACTGACTGGTGATCGGAGGAACTGGCTGGTGATCGGAGGAACTGGCTGGTGAACGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGAACGGACTGGTGATCGGAGGAACTGACTGGTGATCGGAGGAACTGACTGGTGAACGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACCGACTGGTGAACGGAGGAACCGGCAGGTGATCGGACTGGTGAACGGAGGAACTGACTGGTGAATGGAGGAACCGGCTGGTGAATGGAGGAACCGGCTGGTGAATGGAGGAACCGGCTGGTGAACGGAGGAACCGGCTG
>TU2082815
GGTGATTGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAAGGGACTGGTGAACGGACTGGTGATCGGAGGAACGGACTGGTAAACGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGATCGGAGGAATCGGCTGGTGATCGGAGGAACCGGCTGGTGAACGGACTCGTGAACAGAGGAACTGGCTGGTGATCGGAGGAACTGGCTGGTGATCGGAGGAACTGGCTGGTGAACGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGAACGGACTGGTGATCGGAGGAACTGACTGGTGATCGGAGGAACTGACTGGTGAACGGACTGGTGAACGGAGGAACGGACTGGTGAACGGAGGAACGGACTGGTGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGATCGGAGGAACGGACTGGTGAACGGACTGGTGAACGGAGGAACGGACTGGTGATCGGAGGAACGGACAGGTGAACGGACTGGTGATCGGAGGAATGGACTGGTGAACGGAGGAACCGACTGGTGATCGGAGGAACCGGCTGGTGAACGGACTGGTGAACGGAGGAACTGACTGGTGATCGGAGGAACTGGCTGGTGAACGGAGGAACCGGCTGGTGATCGGAGGAACCGGCTGGTGAACGGACTGGTGATCGGAGGAACTGACTGGTGATCGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2082816 False 1270 lncRNA 0.61 2 50919568 50922129
TU2082815 True 719 lncRNA 0.60 3 50920666 50922644

Neighbor

gene id symbol gene type direction distance location
LOC110502197 LOC106582575 coding downstream 66374 50803651 ~ 50853194 (-)
tmem237a LOC105009128 coding downstream 166437 50720697 ~ 50753131 (-)
LOC118943619 NA coding downstream 385820 50521227 ~ 50533748 (-)
cd28 LOC100136275 coding downstream 422714 50495067 ~ 50496991 (-)
si:ch211-67e16.3 LOC106582540 coding downstream 434898 50471747 ~ 50484670 (-)
LOC118943621 NA coding upstream 114820 51037464 ~ 51041332 (-)
sumo-1 sumo-1 coding upstream 119074 51041718 ~ 51052960 (-)
LOC118943622 NA coding upstream 132320 51054964 ~ 51057512 (-)
carf LOC106582551 coding upstream 136610 51059254 ~ 51085922 (-)
LOC118943624 NA coding upstream 139012 51061656 ~ 51063049 (-)
G1820011 NA non-coding downstream 27928 50891279 ~ 50891640 (-)
G1820008 NA non-coding downstream 37324 50881406 ~ 50882244 (-)
G1819985 NA non-coding downstream 49687 50861421 ~ 50869881 (-)
G1819999 NA non-coding downstream 74516 50844608 ~ 50845052 (-)
G1819998 NA non-coding downstream 91081 50827559 ~ 50828487 (-)
G1820033 NA non-coding upstream 44760 50967404 ~ 50967865 (-)
G1820075 NA non-coding upstream 144183 51066827 ~ 51070429 (-)
G1820077 NA non-coding upstream 167170 51089814 ~ 51090146 (-)
G1820059 NA non-coding upstream 269165 51191809 ~ 51195296 (-)
G1820012 NA other downstream 22415 50896572 ~ 50897153 (-)
si:ch211-67e16.4 LOC106582542 other downstream 455806 50460094 ~ 50465680 (-)
G1819250 NA other downstream 614530 50301801 ~ 50305038 (-)
G1819189 NA other downstream 705682 50137937 ~ 50219233 (-)
G1820053 LOC106582548 other upstream 100794 51023438 ~ 51026181 (-)
G1820212 NA other upstream 503759 51426403 ~ 51427042 (-)
LOC110501977 LOC106562996 other upstream 579214 51501853 ~ 51504398 (-)
myo10l3 LOC106582557 other upstream 612328 51510785 ~ 51699385 (-)

Expression


Co-expression Network