XLOC_037350 (map2)


Basic Information

Item Value
gene id XLOC_037350
gene name map2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 38883388 ~ 38993033 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00073490
TTTGATTCTGAGGAGAGGATGCTGGTGTTTGTTGCACTGAGAGACTCATCAGGGCCCTGACGCCTCCTTTTAAATACGCCACCAATCATCGCTGGAGCACCACCAACACCTAGACAGGAGTAAGGAGTGACCCCTCTCCTCTGGTTTAGATGGCAGACGGTCGGCAGCCCGAGGACAGTGGCCCCCAGTGGTCATCTCCGGGAGCCCAGGGCTCATCCTCCCCAGGTGGGCATGGAGAGAATGGCTTCTCTTCCTCCTACAGGACCTGTCAGCCGGGCGCTGGTTCTGCCACTTATGCCAAAGAGAATGGCTTCAATGGAGACCTCACCTCTGGACATGCTGTAACTGCTGAGCAAGTGTCGGCGCGGATCGTGCAGGAGGTTACGGCTGAAGCAGTAGCGGTACTGAAGGGAGAGCAGGAGCTGCATCCGGAAACTGCCGTCAGGCTGCCATCAGTGGAAGACTCCGCAAACCTGCCGCCCTCACCTCCTCCGTCTCCAGCAGCAGAGCATTTCGGGCCTTTGGATCAAGAAGAGGAGACCATAGAGAGTCTCTCAGCTgcggaggaggaagaggaggagactTCAGAAGCCGCAGCCACAGCAGCAGCTctagaggaagaggaggaggaggaggaggaggatgatgagGAGGAGCAGTGGAGTGGGGAGGAGCCTGAGCAGGAACCCCCATCTGAGCTCCTAGAGCGGGCAGAGGTCATAGGCGAGGCCCAGGCTCTCTCTGGCCTGCTGGCCGATGTTCACACACAGGCAGCTACTGCTGCTGACGAGGCTCCTAATGGGAGAGCTGAGGAGGCAGGGGGGCAAGAAAGCCCTACAGAAGGTGTGTCTATCCTTCTCCCGACCTGCATGCTTCTCTCTCCCTTCACAAAATAAGCGAAAGCATCGTGAGAGCTTTCTAAGGGAAtgtgggctcaaatatctcctcTATCTGCTAATGCTGCAAGGCAACACAGGCTTGATGGTGACCAGCTTCTGTGGCCAGagctatgtgtctgtctgtcattgTCTTTCTTCTTAAATGCTTTTCCCAGAGCAGCTGTCATCTGCTAGCTATCTGATGAAGCTTTTTCTGAACCTTTCTGCTTATTTCTGTATTGATGCTACTGCTGCCAGGTCGACCGTTTTCATATGTTGTTATCCattgctcatttatttttatttgccagCTACATTGCCAGTTTGTGGGTGATTTTTGCTGCATGCTCCAACAAAAcacctgcatttttttttcatgtgggatTCTGTGAATCCTCTGCGGTTTGTGATATTGTGATATTGTTATGCTTCATTTTCAAAGGCATTTGAAAAGCCAAGCTTGTTGATTTCATTTAAATGTGATTTCTATCAttaattttgctttttatttttcaaagcattgtcATTTCATGTGgtttacattaaaatgttcatttta
>TCONS_00073491
AGACTCATCAGGGCCCTGACGCCTCCTTTTAAATACGCCACCAATCATCGCTGGAGCACCACCAACACCTAGACAGGAGTAAGGAGTGACCCCTCTCCTCTGGTTTAGATGGCAGACGGTCGGCAGCCCGAGGACAGTGGCCCCCAGTGGTCATCTCCGGGAGCCCAGGGCTCATCCTCCCCAGGTGGGCATGGAGAGAATGGCTTCTCTTCCTCCTACAGGACCTGTCAGCCGGGCGCTGGTTCTGCCACTTATGCCAAAGAGAATGGCTTCAATGGAGACCTCACCTCTGGACATGCTGTAACTGCTGAGCAAGTGTCGGCGCGGATCGTGCAGGAGGTTACGGCTGAAGCAGTAGCGGTACTGAAGGGAGAGCAGGAGCTGCATCCGGAAACTGCCGTCAGGCTGCCATCAGTGGAAGACTCCGCAAACCTGCCGCCCTCACCTCCTCCGTCTCCAGCAGCAGAGCATTTCGGGCCTTTGGATCAAGTGTCTGCAGATGGTCGACTGCCTTTCAGTGTGGCCAGGCACTCAAGAGACCGAGCATCTACTTCCAATCCCACAACACTAACAAAGATCCCCACCTCTAAAATTCGGGCAGAGGCTTTGTTGCCGGCCCGGCCCAACTCCGCCAGCTCCTCCAATA
>TCONS_00073492
AGCCAGTAGCAGAAAAATCTGAGCCTGAAGTTGTCATCAAAAAAGAGGAGATTAAAGTCATTGATAAAAAAGAAGTAGAGAATGAAGAAGTTTTGGAAGGCGCAAAAGCTGCAGAAGAAACTCTTGAGCCTCGAGCTGCGATTGAGTCAGTGGTAACAGTAGAAGATGATTTTATAACAGTGGTGCAGACCATTGATAAGAGCGAAGTGTCTGGACACAGCGTACGCTTCTCGGCTCCCTCTGAAGAGGAACACCCACAGCTCCTacaagaggaagaagaggaggaggaagagtcTGTTGAAATGGCTCAAGAAGTAGAGATGGAGGCTCCCAGTCTGGAGGAAATCGTAGATGTTCCTGAGCCCGTTGAGCCTCCTGTATGTCCAGCTAAAGAGTTAGAGGTACCAGAGAGTGAGGCCCCAACTCAAAGTTATGACGACTACAAAGATGAAACTACCATTGACGACTCCATCTTAGACAGCTCCTGGGTGGACACTCAAGATGATGATAGGAGCATGGCCACAGAGAAAATTGAGCCTCTACCAAGAGTGAAGAGTCCTGTCAAGAAACCAGCCGCAGAGAAACCTGTCAAACCAAAGGCTAAAGGTGGCAGAGCCAAGGGACGGATCTCCACACCTGAACGCAAACCTGTTCGCAAGGAGCCATTACCCCTTCAGAAGGAtgagatgaagaagaaaaaagCTGTGATTAAGAAGGCTGAGttcacaaaaaaatctgatattcaGACGTGCTCTCCTTCCCGGAAGAGTGTTTTAAAGGCTACCGTAAGGCACCCTAGACCTACCCAGCATCATGCGTGTGTTAAGCGGAAACCCACAGTGTCTGCAGATGGTCGACTGCCTTTCAGTGTGGCCAGGCACTCAAGAGACCGAGCATCTGATGGTCGTTCTCGGAGCCCAGAGAAGAGGTCATCTTTGCCCCGTCCTGCATCCATACTAACCCGCCGCTCACACATGGCTGAGCATGAGGAGAGCTCCACTTCCATTACCAGCTCTGGGTCTACCGCACCACGCAGACCCACATGCACAGAGTCAGGTCGGTCCCGCTCTGCCCGCAGCGGCACCTCCACACCCCACACACCCGGCTCAACAGCCATCACCCCTGGCACCCCTCCCAGCTATTCCTGCCGCACCCCGGGCACACCTCGCACCCCAGGGACCCCTAAATCCCTCAGCTTGCTGTCCCAGGAGAAGAAAGTGGCTATCATCCGCACCCCTCCGAAATCTCCGGCTACCACACCCAAACAGCTGCGCGTCCTGAACCAGCCACTGCCCGACCTCAAGAACATCAGATCCAAGATTGGCTCCATCGACAACATCAAGTACCAGCCCAAGGGGGGCCAGATTCACATTCAGTCTAAGAAGATTGATCTTAGTCATGTGACCTCCAAGTGTGGATCATTGGACAACATCCGCCACAGGCCAGGCGGTGGTCATGTCCGCATTGAGAGCGTGAAGCTGGACTTCAGAGAAAAAGCCCACGCCAAAGTGGGCTCCCTGGATAATGCCCACCATACACCTGGAGGAGGTCAAATCCAGATTGAAAGCCATAAGCTCTCCTTCCGCGACGCTGCCAAAGCGCGTGTGGATCACGGAGCGGAGATTGTGATCGAGACGCTCGGGCTGTCCGGCGGGACGTCCCCTCACCGACACAGCCACATGTCCTCATCCGGGAGCATCAACATGCACGAGTCACCACAGCTGGCCACGCTAGCAGAAGATGTGACCGCCGCGCTGGCCAAACAAGGCTTGTGAATCCTCAAAATCTACAGTAGTTTCCCTCCTCAGTGGTGTCACGGTTGACCCTTTCCTTCCTCCCTCTGGTATTTATGGAACACTACAGATTCACTTATTCACACTATTCCCTCTTCATCCGCCAACAAAGCCCTGTCTTgactatctaaaaaaaacaagatgatttttattttgagttttgttcattttaatgaaTTAGCTAGAGAGGTACCAGTGCTTTTTATTACCCATGTTAAATGTGACTTTTTATGGTTGTGTACAGACAGTGGCCTCAAATGCTGGTTTAGGCTGTGTGCTgcgtctaaaaaaaaaagtcggttgatctgaatttttttttttaattacgcaAGAATAATCCCATGATGCACGTGTTTATTTGCCCATTCAGTGCATGGACTCCAAAACATCAAACTGCAatcaaatatacaatatatttataaatataccaGCGCAACATCTCACGCTCaattgaaaaaaagaagaaatgatTATTCCTTCGATAGCATATACTGTAATGCAATCGCATTAAAAACAACAACCCTAGTAGATAGTATGACGAGCATGTATTCTAGTACACAAAAGAGGCTATTTTCTATTTCAAGGGATTTTAGTAAGTTATATGCCGAAACgttgaataaaatgaaaacatcatGTTTTGTAGATACTAGCGACGATGTTTAGCTTGTACATTATTTCAGATGATGCACCCCTGGCTTTGCTGTTGTTACAAAATCGTCTGATCTTTGTCGCTATGCAGTTTTTCGACTGACGTCAAGTTAGCGATGCTGAAGCTAATTTGAGTGAAATCTGCTTGGAGAGCTTTTTGCGACCTCGTGCAAAATTTCGTCAAGCGACAGTAAATGTGACTGCACATTTACACTAAACAGTGATTTCACAATATTAAATGTTCGAGGGCTACAGGTTAACAGGAGTCACGCAAGTTCTGCTTGAACCATAAACCGCCATCTTTAATactcaatccgcttgttaagttgtgacgtatgaaatactgtttctgcGTCCAAGCTACTCGTTTGAATTGAGAACGTAttcatttatgaccactttttagtcatatcacacctTAAAGTGAATTTTCTATAAAATCATAGCGTACACAAcagacttgctgcatcacaaataccaaaactgtaaccatttataaaaaaaaaaaatatcactttctggccatctgatattaggcatggatacatagttaaaataacattttctagAAATAATGAAGCAACATCTCTAGACATCAGCcagaaaattaaaacttggcaacaaatgggtcttccaaacagaccatgactctAGATATTCTGCcacattagttaaaatgtgctttaaggacaacagagtgaatgttttggagtggccatcacaaagccctgagctcaaacctatagaaaatttgtgggcagatttgaaaaagcttgtgcgagcaagactgACACAGTTACACCGGttttgtcaggaggaatgggccaaaaatcctgcaaactattgtgagaagcttgtgaaaggatacccaaaacatttgaccaaagtcatacagtttaaaagcaaagctaaaaaaatatcaaggaaatgtatgtaaacttttgactgtctaaaaaaaaaaaatttctccaaaaaaaaaatctcattattctggcatttagtaaatgtaaatcatttaggtaatcctaacggacctaaaatagtaaacgtttagtatgatttaccatcagacgtttttttttgtaatggttATGTTCCTGTTTtagtatgtaaacttctggtttcaactccATATTgcgattttcgaaagtattacatttcTTTGTAAACGTTTtatattaccatttgatgagtcaaACACAGTTTTATATACTGTAGCACTTgcacccggaagccgcttcgcatgaCATCACTGATTAACAAGCGGATTGGGTTGGATGGTGGTCCTGCGGCCCTCGTTTTCCTCTTGGGAGTTTTGGCCCTGTGTCTGTCTGCTAATTCCTTCTTGGATGCTTAGTTTTCTTTGT
>TCONS_00073493
GTCCAGCTAAAGAGTTAGAGGTACCAGAGAGTGAGGCCCCAACTCAAAGTTATGACGACTACAAAGATGAAACTACCATTGACGACTCCATCTTAGACAGCTCCTGGGTGGACACTCAAGATGATGATAGGAGCATGGCCACAGAGAAAATTGAGCCTCTACCAAGAGTGAAGAGTCCTGTCAAGAAACCAGCCGCAGAGAAACCTGTCAAACCAAAGGCTAAAGGTGGCAGAGCCAAGGGACGGATCTCCACACCTGAACGCAAACCTGTTCGCAAGGAGCCATTACCCCTTCAGAAGGAtgagatgaagaagaaaaaagCTGTGATTAAGAAGGCTGAGttcacaaaaaaatctgatattcaGACGTGCTCTCCTTCCCGGAAGAGTGTTTTAAAGGCTACCGTAAGGCACCCTAGACCTACCCAGCATCATGCGTGTGTTAAGCGGAAACCCACAGTGTCTGCAGATGGTCGACTGCCTTTCAGTGTGGCCAGGCACTCAAGAGACCGAGCATCTGATGGTCGTTCTCGGAGCCCAGAGAAGAGGTCATCTTTGCCCCGTCCTGCATCCATACTAACCCGCCGCTCACACATGGCTGAGCATGAGGAGAGCTCCACTTCCATTACCAGCTCTGGGTCTACCGCACCACGCAGACCCACATCTTTCCGTACTGAAGTCAGAACAGATCACAGGACAGGCAGGTCTCATAGTGCCACAGGCACAGAGTCAGGTCGGTCCCGCTCTGCCCGCAGCGGCACCTCCACACCCCACACACCCGGCTCAACAGCCATCACCCCTGGCACCCCTCCCAGCTATTCCTGCCGCACCCCGGGCACACCTCGCACCCCAGGGACCCCTAAATCCCTCAGCTTGCTGTCCCAGGAGAAGAAAGTGGCTATCATCCGCACCCCTCCGAAATCTCCGGCTACCACACCCAAACAGCTGCGCGTCCTGAACCAGCCACTGCCCGACCTCAAGAACATCAGATCCAAGATTGGCTCCATCGACAACATCAAGTACCAGCCCAAGGGGGGCCAGATTCACATTCAGTCTAAGAAGATTGATCTTAGTCATGTGACCTCCAAGTGTGGATCATTGGACAACATCCGCCACAGGCCAG
>TCONS_00073494
atgGATGGTCGTTCTCGGAGCCCAGAGAAGAGGTCATCTTTGCCCCGTCCTGCATCCATACTAACCCGCCGCTCACACATGGCTGAGCATGAGGAGAGCTCCACTTCCATTACCAGCTCTGGGTCTACCGCACCACGCAGACCCACATGCACAGAGTCAGGTCGGTCCCGCTCTGCCCGCAGCGGCACCTCCACACCCCACACACCCGGCTCAACAGCCATCACCCCTGGCACCCCTCCCAGCTATTCCTGCCGCACCCCGGGCACACCTCGCACCCCAGGGACCCCTAAATCCCTCAGCTTGCTGTCCCAGGAGAAGAAAGTGGCTATCATCCGCACCCCTCCGAAATCTCCGGCTACCACACCCAAACAGCTGCGCGTCCTGAACCAGCCACTGCCCGACCTCAAGAACATCAGATCCAAGATTGGCTCCATCGACAACATCAAGTACCAGCCCAAGGGGGGCCAGATTCACATTCAGTCTAAGAAGATTGATCTTAGTCATGTGACCTCCAAGTGTGGATCATTGGACAACATCCGCCACAGGCCAGGCGGTGGTCATGTCCGCATTGAGAGCGTGAAGCTGGACTTCAGAGAAAAAGCCCACGCCAAAGTGGGCTCCCTGGATAATGCCCACCATACACCTGGAGGAGGTCAAATCCAGATTGAAAGCCATAAGCTCTCCTTCCGCGACGCTGCCAAAGCGCGTGTGGATCACGGAGCGGAGATTGTGATCGAGACGCTCGGGCTGTCCGGCGGGACGTCCCCTCACCGACACAGCCACATGTCCTCATCCGGGAGCATCAACATGCACGAGTCACCACAGCTGGCCACGCTAGCAGAAGATGTGACCGCCGCGCTGGCCAAACAAGGCTTGTGA
>TCONS_00073495
TAAAAGGAGCCAGTTGGTCGAGACAGATCTTTATGAGCTCCGGCCTGCTTCAGCCGGCCCACAAGTATCAATAAATATATATCATGTAAAGGATGGTCGTTCTCGGAGCCCAGAGAAGAGGTCATCTTTGCCCCGTCCTGCATCCATACTAACCCGCCGCTCACACATGGCTGAGCATGAGGAGAGCTCCACTTCCATTACCAGCTCTGGGTCTACCGCACCACGCAGACCCACATGCACAGAGTCAGGTCGGTCCCGCTCTGCCCGCAGCGGCACCTCCACACCCCACACACCCGGCTCAACAGCCATCACCCCTGGCACCCCTCCCAGCTATTCCTGCCGCACCCCGGGCACACCTCGCACCCCAGGGACCCCTAAATCCCTCAGCTTGCTGTCCCAGGAGAAGAAAGTGGCTATCATCCGCACCCCTCCGAAATCTCCGGCTACCACACCCAAACAGCTGCGCGTCCTGAACCAGCCACTGCCCGACCTCAAGAACATCAGA
>TCONS_00073496
GTCAAAGTGCGGATCCAAGGATAATCTGAAGCATTCGCCCCGTGGAGGCAATATTCACATTCAGTCTAAGAAGATTGATCTTAGTCATGTGACCTCCAAGTGTGGATCATTGGACAACATCCGCCACAGGCCAGGCGGTGGTCATGTCCGCATTGAGAGCGTGAAGCTGGACTTCAGAGAAAAAGCCCACGCCAAAGTGGGCTCCCTGGATAATGCCCACCATACACCTGGAGGAGGTCAAATCCAGATTGAAAGCCATAAGCTCTCCTTCCGCGACGCTGCCAAAGCGCGTGTGGATCACGGAGCGGAGATTGTGATCGAGACGCTCGGGCTGTCCGGCGGGACGTCCCCTCACCGACACAGCCACATGTCCTCATCCGGGAGCATCAACATGCACGAGTCACCACAGCTGGCCACGCTAGCAGAAGATGTGACCGCCGCGCTGGCCAAACAAGGCTTGTGAATCCTCAAAATCTACAGTAGTTTCCCTCCTCAGTGGTGTCACGGTTGACCCTTTCCTTCCTCCCTCTGGTATTTATGGAACACTACAGATTCACTTATTCACACTATTCCCTCTTCATCCGCCAACAAAGCCCTGTCTTgactatctaaaaaaaacaagatgatttttattttgagttttgttcattttaatgaaTTAGCTAGAGAGGTACCAGTGCTTTTTATTACCCATGTTAAATGTGACTTTTTATGGTTGTGTACAGACAGTGGCCTCAAATGCTGGTTTAGGCTGTGTGCTgcgtctaaaaaaaaaagtcggttgatctgaatttttttttttaattacgcaAGAATAATCCCATGATGC

Function

symbol description
map2 Predicted to enable microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization and neuron projection development. Predicted to act upstream of or within central nervous system neuron development and microtubule bundle formation. Predicted to be located in cytoplasm and microtubule. Predicted to be active in neuron projection. Is expressed in brain and central nervous system. Orthologous to human MAP2 (microtubule associated protein 2).

GO:

id name namespace
GO:0001578 microtubule bundle formation biological_process
GO:0021954 central nervous system neuron development biological_process
GO:0000226 microtubule cytoskeleton organization biological_process
GO:0031175 neuron projection development biological_process
GO:0043005 neuron projection cellular_component
GO:0005856 cytoskeleton cellular_component
GO:0005874 microtubule cellular_component
GO:0005737 cytoplasm cellular_component
GO:0015631 tubulin binding molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
ko04812 Cytoskeleton proteins

ZFIN:

id description
ZDB-GENE-041010-118 Predicted to enable microtubule binding activity. Predicted to be involved in microtubule cytoskeleton organization and neuron projection development. Predicted to act upstream of or within central nervous system neuron development and microtubule bundle formation. Predicted to be located in cytoplasm and microtubule. Predicted to be active in neuron projection. Is expressed in brain and central nervous system. Orthologous to human MAP2 (microtubule associated protein 2).

Ensembl:

ensembl_id ENSDARG00000055052

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00073490 False 1437 mRNA 0.51 6 38883388 38959196
TCONS_00073491 False 646 mRNA 0.58 6 38888025 38967999
TCONS_00073492 False 3808 mRNA 0.44 9 38962017 38993033
TCONS_00073493 False 1122 mRNA 0.54 8 38962398 38989473
TCONS_00073494 False 879 mRNA 0.59 6 38967248 38991000
TCONS_00073495 False 505 mRNA 0.59 3 38967998 38975028
TCONS_00073496 True 829 mRNA 0.48 4 38983895 38991366

Neighbor

gene id symbol gene type direction distance location
XLOC_037349 CR376853.1 coding upstream 96344 38786928 ~ 38787044 (+)
XLOC_037348 kansl1l coding upstream 108985 38712474 ~ 38774403 (+)
XLOC_037347 heg1 coding upstream 175878 38684871 ~ 38707510 (+)
XLOC_037346 slc12a8 coding upstream 201151 38644976 ~ 38682237 (+)
XLOC_037345 znf148 coding upstream 242081 38624478 ~ 38641307 (+)
XLOC_037351 CR812481.1 coding downstream 17399 39010432 ~ 39014598 (+)
XLOC_037352 cps1 coding downstream 33278 39026311 ~ 39139722 (+)
XLOC_037353 NA coding downstream 870220 39863253 ~ 39865672 (+)
XLOC_037354 BX255912.2 coding downstream 1144464 40137497 ~ 40137612 (+)
XLOC_037355 BX936447.2 coding downstream 1285114 40278147 ~ 40278263 (+)
XLOC_037331 BX548038.2 non-coding upstream 721999 38161263 ~ 38161389 (+)
XLOC_037330 BX548038.1 non-coding upstream 722816 38160446 ~ 38160572 (+)
XLOC_037326 NA non-coding upstream 859327 38021890 ~ 38024061 (+)
XLOC_037325 CU896658.1 non-coding upstream 1005838 37877434 ~ 37877550 (+)
XLOC_037359 BX323586.1 non-coding downstream 1902616 40895649 ~ 40897183 (+)

Expression


Co-expression Network