Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943822 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 1896283 ~ 1896581 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: translation initiation factor IF-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039103.1 | True | 228 | mRNA | 0.46 | 3 | 1896283 | 1896581 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515109 | LOC106611092 | coding | downstream | 339154 | 1517507 ~ 1557129 (-) |
| LOC110517589 | LOC106577065 | coding | downstream | 409671 | 1352981 ~ 1486612 (-) |
| LOC110515341 | LOC106577436 | coding | downstream | 551551 | 1305547 ~ 1344732 (-) |
| LOC118943914 | NA | coding | downstream | 1003706 | 844436 ~ 892577 (-) |
| LOC118943847 | NA | coding | upstream | 352571 | 2246705 ~ 2249800 (-) |
| LOC110511972 | LOC106613891 | coding | upstream | 353935 | 2250516 ~ 2255447 (-) |
| LOC110519246 | LOC106591225 | coding | upstream | 426383 | 2322964 ~ 2324578 (-) |
| LOC118943863 | arid5b | coding | upstream | 491440 | 2388021 ~ 2493351 (-) |
| LOC118943899 | LOC106592999 | coding | upstream | 617398 | 2513318 ~ 2528846 (-) |
| G1822081 | NA | non-coding | downstream | 5135 | 1888208 ~ 1891148 (-) |
| G1822080 | NA | non-coding | downstream | 11584 | 1883646 ~ 1884699 (-) |
| G1822060 | NA | non-coding | downstream | 27882 | 1868145 ~ 1868401 (-) |
| G1822058 | NA | non-coding | downstream | 29051 | 1867010 ~ 1867232 (-) |
| G1822045 | NA | non-coding | downstream | 108934 | 1786966 ~ 1787349 (-) |
| G1822098 | NA | non-coding | upstream | 18356 | 1914937 ~ 1923478 (-) |
| G1822109 | NA | non-coding | upstream | 35232 | 1931813 ~ 1932027 (-) |
| G1822110 | NA | non-coding | upstream | 36423 | 1933004 ~ 1933211 (-) |
| G1822229 | NA | non-coding | upstream | 43798 | 1940379 ~ 1940876 (-) |
| G1822265 | NA | non-coding | upstream | 129380 | 2025961 ~ 2027128 (-) |
| G1822025 | NA | other | downstream | 130746 | 1763993 ~ 1766638 (-) |
| G1821923 | NA | other | downstream | 382842 | 1502951 ~ 1513441 (-) |
| G1821682 | NA | other | downstream | 664016 | 1231836 ~ 1232267 (-) |
| G1822308 | LOC106577261 | other | upstream | 234731 | 2131312 ~ 2132511 (-) |
| G1822333 | NA | other | upstream | 304004 | 2200585 ~ 2250217 (-) |
| G1823141 | NA | other | upstream | 608986 | 2505567 ~ 2506443 (-) |
| LOC118943857 | LOC106563104 | other | upstream | 1386552 | 3281355 ~ 3325024 (-) |
