LOC110510403 (LOC106591053)


Basic Information

Item Value
gene id LOC110510403
gene name LOC106591053
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 2738091 ~ 2751875 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960369.1
TTATAAAAGAGGTGTGGACCAGAGAAAGTACTGAGTGATGCAACATGCTCTGGGCTGCCTTTATAAAAGAGGTGTGCATCTTAGTGGGGACAAACAGCTCATGAAGACACTGACATCTGTCACTGATACAGGACGTCCATTCAACATACTATTCTGAAGTTTCCTTCAAAGGCAAACAGACATCTATCACAACAACGATGTCCATCTTGCTGCTGGCTCTACTGGTCCCCGTGATGGTGCAGTCCTCCCTGCATCCAGTGGACTGTGATGAGGTCTATAGATCAGGTTCTGGACAAAACGGGGTCTACACCATCTACCCTGCAGGACCTACCTCACCTGTCCAGGTCTTCTGTGACATGGGGTTTGAAAGTGCATATCTAGGAAAGTGGACGCTGATTCAGAGCCGACAGGATGGATCAGTGAACTTCTACAGGAAGTGGGATCAGTACAAGAGTGGTTTTGGGAGCGCAGCTGGAGAGTACTGGCTGGGGCTGGAGACAATGCATCTCATGACTATGAAAGGAACCTATGAGCTGAGGGTGGACATGGAGGACTTTGAGGGGAATAAGGTCTATGCTCAGTACTCTTCCTTCTCCGTTGGACCAGAGGCTGAAGGATACCTGCTAACACTGGGctcattcaaagatggaggagCAGGAGATTGTCTGGTTTTTCACAATGGTCACAAATTTACAACGTTAGATAAAGACCAGGACCTTGCCGACGCCAACTGTGCCCAGGTGTACTACGGAGGATTTTGGTACACCAACTGCCATGTTACTAACCCCAATGGGATATATGCATGGGGCGAGTCTACCTTTGGTATTGGCATCAACTGGAAATCATGGAAAGGCTATACATACTCCCTGAAAGCCATCACCATGAAGATCAGACCAGCCCCAGCCCCTCAATAATTTCTAACACAATTGGAAAATCGGATTTTTCAATAACAATTATTGCCATACAAACATTTCCAGCACATGCACATATTCCATTTATAAGGGAGTCTTTGTTTTAAGTAGGGTTTGTGTTTGGGTCTTCAGAGTTTAGAAGGTGCAGCAGGATACAGAAGATCTCAGATCTACTCTGAAGTGCAGTGTTGCCATAGCAACAGAACCCTGACTGCAGTGGGGATTATATGACTCTGACCCATCATTTaactatctctgtctcttaccttaacacactgtctgtctcttaccctaacacactgtctgtctcttaccctaacacactgtctgtctcttaccttaacacactgt

Function

NR:

description
microfibril-associated glycoprotein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960369.1 True 1262 mRNA 0.46 6 2738091 2751875

Neighbor

gene id symbol gene type direction distance location
LOC118943899 LOC106592999 coding downstream 209245 2513318 ~ 2528846 (-)
LOC118943863 arid5b coding downstream 244740 2388021 ~ 2493351 (-)
LOC110519246 LOC106591225 coding downstream 413513 2322964 ~ 2324578 (-)
LOC110511972 LOC106613891 coding downstream 482644 2250516 ~ 2255447 (-)
LOC118943847 NA coding downstream 488291 2246705 ~ 2249800 (-)
LOC110531337 LOC105026297 coding upstream 180694 2932569 ~ 2963524 (-)
LOC110518872 LOC106594258 coding upstream 226191 2978066 ~ 3007599 (-)
LOC110518874 LOC105026292 coding upstream 257829 3009704 ~ 3012943 (-)
LOC110518781 entpd1 coding upstream 348689 3100564 ~ 3172786 (-)
trnal-uaa-60 NA coding upstream 424184 3176059 ~ 3176131 (-)
G1823252 NA non-coding downstream 16870 2720118 ~ 2721221 (-)
G1823251 NA non-coding downstream 24187 2711782 ~ 2713904 (-)
G1823213 NA non-coding downstream 80373 2657439 ~ 2657718 (-)
G1823210 NA non-coding downstream 84447 2653257 ~ 2653644 (-)
G1823197 NA non-coding downstream 89327 2648562 ~ 2648764 (-)
G1823263 NA non-coding upstream 9391 2761266 ~ 2762132 (-)
G1823289 NA non-coding upstream 80821 2832696 ~ 2834058 (-)
G1823288 NA non-coding upstream 82614 2834489 ~ 2836485 (-)
G1823297 NA non-coding upstream 86578 2838453 ~ 2839289 (-)
G1823302 NA non-coding upstream 91560 2843435 ~ 2843911 (-)
G1823141 NA other downstream 231648 2505567 ~ 2506443 (-)
G1822333 NA other downstream 487874 2200585 ~ 2250217 (-)
G1822308 LOC106577261 other downstream 605580 2131312 ~ 2132511 (-)
G1822081 NA other downstream 846943 1888208 ~ 1891148 (-)
LOC118943857 LOC106563104 other upstream 531258 3281355 ~ 3325024 (-)
G1823530 NA other upstream 753702 3505577 ~ 3506272 (-)
LOC118943921 LOC106600605 other upstream 803138 3553536 ~ 3601859 (-)
LOC118943842 LOC106577176 other upstream 1039156 3791031 ~ 3820702 (-)
G1823691 NA other upstream 1092618 3844493 ~ 3846920 (-)

Expression


Co-expression Network