LOC110518781 (entpd1)


Basic Information

Item Value
gene id LOC110518781
gene name entpd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3100564 ~ 3172786 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959855.1
gagagggggagttgggaagagagagggggaggagggtagagagaggaggctggcAGCTTGTTCTAATAAAGAGCCTGTTGATAGATAGAGGTGCAGGgtaagggtggaggagagagcagtgtgtATGAAAGAGAACgaggtagagaaggaggggagagaaagagaggagaagagagagaggagagaggaaaggaaggaagaaagagagcaaagagagccgtttgtgtgttagagagaagaggggagagagagggagggggagagagaatagaaagacTGTTATATCACTGCTAAGCGATACAGACCATGGCTGAACAGAGAGaGACGAAAGGAAAGAACGCTTGGTATAAGGCTGTGATCATCATCACTGTGCTTGGTATCACAGCGATAGTTGCCCTGGTGACAACAGCAGTATTGCAGAACAAGCCTCTCCTACAGAAGTACAAGtaTGGGATCGTCCTGGATGCTGGCTCCTCACATACAGCAGTGTATATCTACGAGTGGCCAGCAGAGAAGGATAACGACACTGGAAGAGTGCAGCAGACACACTCCTGCAAAGTCCAagGTGCTGGTATCTCCAGCTACTCTGTGTTTCCAGGGCAGGCAGGGGCGTCTCTGAAGAGCTGTATGAAGGAAGCAGAGAGCCTCATCCCCCTAAGCAGGCACCACGAGACCCCCCTCTACCTGGGGGCCACCGCCGGAATGAGGCTGCTCAGgatggaGAACCAGAGTTTGTCTGATCAGGTGCTTTGGTCAGTAGAGGAGGTGTTGCGGTCCTCTCCGTTCTCCTATCAGGGCGCTCGCATCATCACAGGCCAGGAGGAGGGAGCCTTCGGCTGGGTCACTGTTAACTACCTGAGTGACCGACTGAAACAGggctcAGGGACCACCGGAGCTCTTGACCTGGGCGGAGCCTCCACTCAGATCAGCTTTGTAGCCAATCAGGATGTGGCGGAGGAATCGGCGGAGAACGCTGTGACCTTCCGTCTGTATGGAAATGACTACTTCCTCTACACACACAGTTTCCTGTGCTACGGGAAAGACCAAGCGCTCAAACTGGCGCTTGCTCAGCAGACTCAGtctggggACAGCTCAGTGCTAGACCCGTGTTTCCACCCAGGTTATAGTGTTGATCGAAGCTACTTTAGCGTGTACTCCAGCCCATGCGTCATGGCTGGGAAACCCCTCGTCTCCAGGGACAGTTTCACTCACGTAGGAGCAGGAAACGCATCATTGTGCCAGGAAGTAGTCAGAAGAATCTTCAACTTCAGTAGCTGCAGCTTCAGTCGCTGTTCTTTCAACAGGGTCTACCAGCCACCACTACAGGGGCCGTTTGGGgcatTCTCAGCATTCTACTTTGTGATGAACTTTCTGAACTTGACATCAGGCTCTCTGGAAAGCAGCAGGGAGAAGCTGGAGCGCTACTGTTCTAGACCCTGGACccagatCAAACAGCAGCACCCTGATGTGAAGGAGAAGTATCTGGCAGAGTATTGTTTCTCTGGGAGCTACatcctgtctctactgactgacggATACAACTTCACCTCAGATACATGGACAGACATCACGTTCATCAAGAAGattTCAGGTAGTGATGCAGGTTGGACGTTGGGCTACATGCTGAATCTGACCAATATGATTCCAGCCGAGGCTCCagacactcctcctcttcctcacgcCGGCTACGtcaccctcctcttcttcatctctcttctcctcttcttcctcctcttcctctgtttccGATTCCTGAGGCCGCGCCGCAACTCCCAGACACAGATGATATAGACACGCTGGACACCATaaggacactgtgtgtgtgtgtgtgtgtgtgtgtgaactatgtGAACATGATGTTTATAAAATGTATCTCATGTTGTCATGCTTCTTATTCTCCAGTAAAGTTCAGATGTATAAAACAAA
>XM_036959856.1
gagagggggagttgggaagagagagggggaggagggtagagagaggaggctggcAGCTTGTTCTAATAAAGAGCCTGTTGATAGATAGAGGTGCAGGgtaagggtggaggagagagcagtgtgtATGAAAGAGAACgaggtagagaaggaggggagagaaagagaggagaagagagagaggagagaggaaaggaaggaagaaagagagcaaagagagccgtttgtgtgttagagagaagaggggagagagagggagggggagagagaatagaaagacTGTTATATCACTGCTAAGCGATACAGACCATGGCTGAACAGAGAGaGACGAAAGGAAAGAACGCTTGGTATAAGGCTGTGATCATCATCACTGTGCTTGGTATCACAGCGATAGTTGCCCTGGTGACAACAGCAGTATTGCAGAACAAGCCTCTCCTACAGAAGTACAAGtaTGGGATCGTCCTGGATGCTGGCTCCTCACATACAGCAGTGTATATCTACGAGTGGCCAGCAGAGAAGGATAACGACACTGGAAGAGTGCAGCAGACACACTCCTGCAAAGTCCAagGTGCTGGTATCTCCAGCTACTCTGTGTTTCCAGGGCAGGCAGGGGCGTCTCTGAAGAGCTGTATGAAGGAAGCAGAGAGCCTCATCCCCCTAAGCAGGCACCACGAGACCCCCCTCTACCTGGGGGCCACCGCCGGAATGAGGCTGCTCAGgatggaGAACCAGAGTTTGTCTGATCAGGTGCTTTGGTCAGTAGAGGAGGTGTTGCGGTCCTCTCCGTTCTCCTATCAGGGCGCTCGCATCATCACAGGCCAGGAGGAGGGAGCCTTCGGCTGGGTCACTGTTAACTACCTGAGTGACCGACTGAAACAGggctcAGGGACCACCGGAGCTCTTGACCTGGGCGGAGCCTCCACTCAGATCAGCTTTGTAGCCAATCAGGATGTGGCGGAGGAATCGGCGGAGAACGCTGTGACCTTCCGTCTGTATGGAAATGACTACTTCCTCTACACACACAGTTTCCTGTGCTACGGGAAAGACCAAGCGCTCAAACTGGCGCTTGCTCAGCAGACTCAGtctggggACAGCTCAGTGCTAGACCCGTGTTTCCACCCAGGTTATAGTGTTGATCGAAGCTACTTTAGCGTGTACTCCAGCCCATGCGTCATGGCTGGGAAACCCCTCGTCTCCAGGGACAGTTTCACTCACGTAGGAGCAGGAAACGCATCATTGTGCCAGGAAGTAGTCAGAAGAATCTTCAACTTCAGTAGCTGCAGCTTCAGTCGCTGTTCTTTCAACAGGGTCTACCAGCCACCACTACAGGGGCCGTTTGGGgcatTCTCAGCATTCTACTTTGTGATGAACTTTCTGAACTTGACATCAGGCTCTCTGGAAAGCAGCAGGGAGAAGCTGGAGCGCTACTGTTCTAGACCCTGGACccagattTCAGGTAGTGATGCAGGTTGGACGTTGGGCTACATGCTGAATCTGACCAATATGATTCCAGCCGAGGCTCCagacactcctcctcttcctcacgcCGGCTACGtcaccctcctcttcttcatctctcttctcctcttcttcctcctcttcctctgtttccGATTCCTGAGGCCGCGCCGCAACTCCCAGACACAGATGATATAGACACGCTGGACACCATaaggacactgtgtgtgtgtgtgtgtgtgtgtgtgaactatgtGAACATGATGTTTATAAAATGTATCTCATGTTGTCATGCTTCTTATTCTCCAGTAAAGTTCAGATGTATAAAACAAA

Function

symbol description
entpd1 Predicted to enable guanosine-diphosphatase activity and uridine-diphosphatase activity. Acts upstream of or within cellular response to methanol; response to copper ion; and response to ethanol. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including cardiovascular system; digestive system; hindbrain neural plate; nervous system; and periderm. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 64. Orthologous to human ENTPD1 (ectonucleoside triphosphate diphosphohydrolase 1).

NR:

description
ectonucleoside triphosphate diphosphohydrolase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959855.1 False 1926 mRNA 0.52 10 3100564 3172786
XM_036959856.1 True 1788 mRNA 0.52 9 3100564 3172786

Neighbor

gene id symbol gene type direction distance location
LOC110518874 LOC105026292 coding downstream 87621 3009704 ~ 3012943 (-)
LOC110518872 LOC106594258 coding downstream 92965 2978066 ~ 3007599 (-)
LOC110531337 LOC105026297 coding downstream 137040 2932569 ~ 2963524 (-)
LOC110510403 LOC106591053 coding downstream 348689 2738091 ~ 2751875 (-)
LOC118943899 LOC106592999 coding downstream 571718 2513318 ~ 2528846 (-)
trnal-uaa-60 NA coding upstream 3273 3176059 ~ 3176131 (-)
trnav-uac-24 NA coding upstream 4058 3176844 ~ 3176916 (-)
trnav-uac-25 NA coding upstream 10916 3183702 ~ 3183774 (-)
trnav-uac-26 NA coding upstream 11707 3184493 ~ 3184565 (-)
trnav-uac-27 NA coding upstream 12643 3185429 ~ 3185501 (-)
G1823373 NA non-coding downstream 4063 3019676 ~ 3096501 (-)
G1823394 NA non-coding downstream 21159 3071166 ~ 3079405 (-)
G1823381 NA non-coding downstream 51024 3047146 ~ 3049540 (-)
G1823368 NA non-coding downstream 72116 3008193 ~ 3028448 (-)
G1823375 NA non-coding downstream 77243 3022342 ~ 3023321 (-)
G1823431 NA non-coding upstream 5163 3177949 ~ 3178340 (-)
G1823433 NA non-coding upstream 8187 3180973 ~ 3181192 (-)
G1823434 NA non-coding upstream 9168 3181954 ~ 3182513 (-)
G1823435 NA non-coding upstream 9789 3182575 ~ 3182816 (-)
G1823439 NA non-coding upstream 30575 3203361 ~ 3207885 (-)
G1823141 NA other downstream 594121 2505567 ~ 2506443 (-)
G1822333 NA other downstream 850347 2200585 ~ 2250217 (-)
G1822308 LOC106577261 other downstream 968053 2131312 ~ 2132511 (-)
G1822081 NA other downstream 1209416 1888208 ~ 1891148 (-)
LOC118943857 LOC106563104 other upstream 110347 3281355 ~ 3325024 (-)
G1823530 NA other upstream 332791 3505577 ~ 3506272 (-)
LOC118943921 LOC106600605 other upstream 382227 3553536 ~ 3601859 (-)
LOC118943842 LOC106577176 other upstream 618245 3791031 ~ 3820702 (-)
G1823691 NA other upstream 671707 3844493 ~ 3846920 (-)

Expression


Co-expression Network