LOC110531464 (alb1)


Basic Information

Item Value
gene id LOC110531464
gene name alb1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 3900902 ~ 3914858 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960902.1
CCCTGCATTTCTCCATTCCTCGGCTCAATCGCTAGATCCcgtcctccatccatccctccttctctccatccatccctccgtccGTGCGCCTGTCCTTTCATCATGCAGTGGTTGTCTGTCTGCAGCCTGTTGGTGCTGCTGAGTGTGTCAGCCCGGTCTCAGGCTCAGAACCAGATCTGTACCATCTTCACGGAGGCCAAGGAAGATGGATTCAAATCTTTGATCCTTGTAGGGCTGGCTCAGAATCTTCCCGATAGTACGTTGGGTGACTTGGTGCCTCTCATCGCGGAGGCCTTAGCCATGGGCGTCAAATGCTGCTCAGACACTCCTCCAGAGGACTGCGACAGAGATGTGgcggaCCTGTTCCAGAGTGCGGTGTGTTCCTCTGAGACCCTGGTGGAGAAGAACCATCTGAAGATGTGCTGTGAGAAGACTGCCGCTGAGAGGACACACTGCTTCCTGGACCACAAGGCCAAGaTTCCTCGGGACCTGTCCCTCAAAGCTGAGCTGCCCGCTGCAGACCAGTGTGAAGACTTCAAGAAGGACCACAAGGCTTTTGTTGGGAGgttcATCTTCAAGTTCTCCAAGAGTAACACGATGCTACAACCACATGTGATCCTGGCTATCGCCAAAGCTTATGGAGAGGTTCTGACTAGCTGTTGTGGAGAGGCTGAGGCCCAGACTTGCTTCGACACCAAGaaAGCTACTTTCCAACGCGCCGTCGGGAAACGCGTGACTGAACTCAGGGCCCTGTGCATCGTCCACAAGAAATATGGAGACCGCGTTGTCAAGGCCAAGAAGCTGATCCAGTACAGTCAGAAGATGCCTCAGGCCTCTTTCCAGGAGATGGGAGGCATGGTAGACAAGATCGTAGCGACTGTTGCCCCCTGCTGCAGCGGAGACATGGTCACATGCATGAAGGAGAGGAAGGCCCTGGTGGATGAGGTGTGTGCTGATAAGAGTGTGTTGTCTCGCGCGGCGGGTCTGTCTGCATGCTGTAAGGAGGATGCAGTACACAGAGGGTCCTGTGTTGAGGCCATGAAGCCAGACTCTAAGCCAGACGGTCTGTCTGAGCACTACGACGTTCACGCTGACATAGCAGCAGTCTGCCAGACCTTTACCAAGACCCCGGATGTAGCCATGGGgaaGTTGGTGTATGAGATCTCAGTGCGTCACCCTGAGTCGTCTCAGCAGGTGATTCTGAGGTTCGCCAAGGAGGCTGAGCAGGCCTTGCTCCAGTGCTGTGACAAGGAGGACCATGCAGAGTGTGTCAGAACCGCTCTGGCAGGAAGTGATATTGATAAGAAGATCACTGATGAGACTGACTACTACAAGAAGATGTGTGCTGTTGAGACTGGCATGAACAATAACGCCTTTGAGAAGAGTATGATGGTGCACTACACCAGGATAATGCCCCAGGCCTCCTTCGACCAGCTCCACATAGTGTCAGAGAGGGTGCATGATGTTCTCCATGACTGCTGCAAGGACGAGCCAGGCCACTTCATCCTGCCTTGTGCAGAGGAGaagCTGACCGATGCCATCGACGCCACATGTGAGGACTACGACCCCTCCAGCATTAACCCCCGCATCGCCCACTGCTGCAACCAGTCCTACTCCATGAGGAGACCCTGTATCCTGGCCATCCAGCCTGACACGGAGTTCATGCCCCCAGAGCTGGATGCCAGCAACTTCCACATGGGCCCTGAGCTCTGCACCAAGGACAGCAAGGAGCTGCTGCTCTCTGGGAAGAAacTACTGTATGGTGTGGTCAGACATAAGACCACCATCACTGAGGAGCAGCTGAAGTCCATCTCTACTAAATATCACAGTATGAAGGAGAAGTGCTGTGCTGCTGAGGACCAAGCAGCATGCTTCACTGAGGAGGCACCCAAGCTGGTTGCTGAGAGTGCAGAGCTGGTCAAGGCTTAAGATAGAATTGTGATGATTTTAATTTCAAAAGATGAactgatgatttaaaaaaaataaaaataataaaggTTCTGTCTGTATCGATCCATCTACCTCCCCAGCCTACATTTACACCATGGTGACCTCATCCTCCTATCCACAACGTCTTGTCATCCACTCATAAGTCTGTCTATCAGTGATCTGTGATCGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATCGACTCATAAGTCTGTCTATCAGTGATCTGTGATCGACTCATAAGTCTGTCTTTCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGTCTGTCTATCAGTGATCTGTGATTGACTCATAAGCCTTACAGCCTACCCTCATCAAACCTCTATCTGGGATGAATCACGCCGCTGGTTAATTTCTGATAGACATGAATGACTCCTGTCAATCAAATACACATGAATAACTGAATAAAGTCATGTTTATCAACTGTA

Function

symbol description
alb1 Involved in ribosomal large subunit biogenesis. Located in cytoplasm and nucleus.

NR:

description
serum albumin 1 precursor

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005615 extracellular space cellular_component
GO:0046872 metal ion binding molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K16141 ALB; serum albumin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960902.1 True 2565 mRNA 0.50 14 3900902 3914858

Neighbor

gene id symbol gene type direction distance location
rel LOC106577316 coding downstream 5391 3868056 ~ 3895511 (-)
LOC118936586 pex13 coding downstream 70685 3821289 ~ 3830217 (-)
LOC118943842 LOC106577176 coding downstream 80200 3791031 ~ 3820702 (-)
LOC118936584 LOC106577178 coding downstream 207707 3685607 ~ 3693195 (-)
LOC118943921 LOC106600605 coding downstream 299043 3553536 ~ 3601859 (-)
LOC110532916 LOC106577328 coding upstream 10463 3925321 ~ 3937927 (-)
LOC110510589 papolg coding upstream 35932 3950790 ~ 3974808 (-)
LOC118943849 NA coding upstream 85077 3999935 ~ 4001461 (-)
LOC118943848 NA coding upstream 87844 4002702 ~ 4006322 (-)
LOC110531385 LOC106594327 coding upstream 92223 4007081 ~ 4038275 (-)
G1823642 NA non-coding downstream 19185 3878206 ~ 3881717 (-)
G1823699 NA non-coding downstream 26924 3873475 ~ 3873978 (-)
G1823694 NA non-coding downstream 41081 3859573 ~ 3859821 (-)
G1823643 NA non-coding downstream 55043 3790052 ~ 3845859 (-)
G1823717 NA non-coding upstream 33580 3948438 ~ 3948665 (-)
G1823724 NA non-coding upstream 75783 3990641 ~ 3991228 (-)
G1823725 NA non-coding upstream 76446 3991304 ~ 3991819 (-)
G1823734 NA non-coding upstream 103950 4018808 ~ 4020441 (-)
G1823691 NA other downstream 53982 3844493 ~ 3846920 (-)
G1823530 NA other downstream 394630 3505577 ~ 3506272 (-)
LOC118943857 LOC106563104 other downstream 576113 3281355 ~ 3325024 (-)
G1823710 NA other upstream 19035 3933893 ~ 3936043 (-)
G1824125 NA other upstream 746733 4661591 ~ 4662234 (-)
G1824416 NA other upstream 890606 4805464 ~ 4820448 (-)
G1824458 NA other upstream 1011555 4926413 ~ 4926815 (-)
G1824524 NA other upstream 1204902 5119760 ~ 5120944 (-)

Expression


Co-expression Network