Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110514830 |
| gene name | dock1 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 5460328 ~ 5999146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| dock1 | Predicted to enable guanyl-nucleotide exchange factor activity. Acts upstream of or within myelination in peripheral nervous system and myoblast fusion. Predicted to be located in cytoplasm and membrane. Predicted to be integral component of membrane. Orthologous to human DOCK1 (dedicator of cytokinesis 1). |
| description |
|---|
| Dedicator of cytokinesis protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036960811.1 | False | 6508 | mRNA | 0.50 | 51 | 5460328 | 5959937 |
| XM_036960810.1 | False | 6745 | mRNA | 0.50 | 52 | 5460328 | 5999145 |
| XM_036960806.1 | False | 6761 | mRNA | 0.50 | 52 | 5460328 | 5999146 |
| XM_036960807.1 | False | 6761 | mRNA | 0.50 | 53 | 5460328 | 5999146 |
| XM_036960808.1 | False | 6755 | mRNA | 0.50 | 52 | 5460328 | 5999146 |
| XM_036960809.1 | False | 6752 | mRNA | 0.50 | 52 | 5460328 | 5999146 |
| TU2089520 | True | 820 | TUCP | 0.51 | 8 | 5945112 | 5999105 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943897 | LOC106613906 | coding | downstream | 34722 | 5423399 ~ 5425606 (-) |
| LOC118943918 | NA | coding | downstream | 109900 | 5340523 ~ 5350428 (-) |
| LOC118943892 | LOC106592985 | coding | downstream | 139093 | 5172031 ~ 5321235 (-) |
| LOC118943901 | NA | coding | downstream | 306646 | 5151380 ~ 5153682 (-) |
| LOC110531385 | LOC106594327 | coding | downstream | 1422053 | 4007081 ~ 4038275 (-) |
| LOC110515214 | bccip | coding | upstream | 367875 | 6367021 ~ 6376535 (-) |
| LOC110510773 | LOC106613841 | coding | upstream | 747227 | 6746373 ~ 6813723 (-) |
| LOC110518105 | LOC106592890 | coding | upstream | 886208 | 6885354 ~ 6901189 (-) |
| LOC118943880 | gpr26 | coding | upstream | 1398013 | 7397159 ~ 7409361 (-) |
| LOC110531557 | fbx37 | coding | upstream | 1975773 | 7974919 ~ 7979808 (-) |
| G1824663 | NA | non-coding | downstream | 6299 | 5453730 ~ 5454029 (-) |
| G1824654 | NA | non-coding | downstream | 20738 | 5439360 ~ 5439590 (-) |
| G1824653 | NA | non-coding | downstream | 21370 | 5438703 ~ 5438958 (-) |
| G1824652 | NA | non-coding | downstream | 22026 | 5437858 ~ 5438302 (-) |
| G1824651 | NA | non-coding | downstream | 24944 | 5434354 ~ 5435384 (-) |
| G1825085 | NA | non-coding | upstream | 1923 | 6001069 ~ 6001346 (-) |
| G1825136 | NA | non-coding | upstream | 5388 | 6004534 ~ 6015319 (-) |
| G1825146 | NA | non-coding | upstream | 25316 | 6024462 ~ 6025554 (-) |
| G1825148 | NA | non-coding | upstream | 34082 | 6033228 ~ 6034885 (-) |
| G1825150 | NA | non-coding | upstream | 38639 | 6037785 ~ 6040242 (-) |
| G1824605 | NA | other | downstream | 120427 | 5338573 ~ 5339901 (-) |
| G1824563 | NA | other | downstream | 212371 | 5247008 ~ 5247957 (-) |
| G1824561 | NA | other | downstream | 223596 | 5236377 ~ 5236732 (-) |
| G1824540 | NA | other | downstream | 293954 | 5165808 ~ 5166374 (-) |
| G1824524 | NA | other | downstream | 339384 | 5119760 ~ 5120944 (-) |
| G1825145 | NA | other | upstream | 22390 | 6021536 ~ 6023962 (-) |
| G1825493 | LOC106593079 | other | upstream | 352942 | 6352088 ~ 6354021 (-) |
| G1825582 | NA | other | upstream | 658972 | 6658118 ~ 6659951 (-) |
| G1825658 | NA | other | upstream | 824022 | 6823168 ~ 6825818 (-) |
| G1825645 | LOC106593297 | other | upstream | 927706 | 6926852 ~ 6943944 (-) |
| LOC118943912 | NA | coding | downstream | 439635 | 5503698 ~ 5505477 (-) |
| G1825041 | NA | non-coding | downstream | 75995 | 5866464 ~ 5869117 (-) |
| G1825034 | NA | non-coding | downstream | 105606 | 5839208 ~ 5839506 (-) |
| G1825030 | NA | non-coding | downstream | 121510 | 5823240 ~ 5823602 (-) |
| G1825029 | NA | non-coding | downstream | 123103 | 5821570 ~ 5822009 (-) |
| G1825024 | NA | non-coding | downstream | 128481 | 5816364 ~ 5816631 (-) |
