LOC110503047


Basic Information

Item Value
gene id LOC110503047
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 10338539 ~ 10343205 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002470420.2
AACTAAGACTTAGCTAGTTTTCGTGTTTCCTAGCTATGTATATTTTAATCACATGCTTAAACTGCAAAATCAAGATATATATTTCCAGGGCCTTAGTGCCCTGGCTGATTGTTTTGTTGCACTGGCAGATCAGGCACCCCCTTAAGGCATTGTCCCTAAAATTCCTTCCCTGGTATGTTATGCTCTTCAAACAGGTTGCCCTGGAGTTCATGGGACTGACTGGTGTCTGTGGACCTCAAGAAGACATTTTATGAAGGCCTGGACAGTCTTGACAAAGACAGTTCCAATCAAAGGAAGAGAAACGCTGTGCTCCGAGGCTTGCCATACTTCCTGCGAGAAGACCCTACCAATTTTTTGAAGACTTGAGAAGACAACTGATTCAGAGGAAGGCACCCGCGGAGTGAAAGTTGTTGTGGATGGAGCTGAAGCAGGTGACCCAATGCCAGCTTACAATGTGGATATTGCCCTTGTGATGGAAGAGCAGGTGATCATCGTACATGAGCTTCACAATGTCCCAAATGCCTTTGCCACTTTGATTGGACTTCTTTAATGTCTGAATATGGATTACTCAAAAATGTTTGAGGTCTACTTTTGAGGTAGTTCAGAAAATATTCTTGAAGATTGGTGCAGAAAACTACAGCAAAGGTCCATAGGCTGAACCGTCTTCTTCGTTAAGACAActaatttgtgtgtttttgttttactcGCAGTAGTTGAGTTCATTCCTCGGACAATGATGCTGTTATTTGCCTAAATCTTAGAAATCTCAGTTTTGGGAAGACTTAAGTTACCCTATTTTTATGTGTGACCTTCAGTCTACAAACTGAAGGTCAAAAAGTGCATTCTGAAAATGTTTACAGCATGTTAgaatttttcacactcaacaccAACTTGTCATATAAACTGTTCTGAAGGTTGTCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002470420.2 True 921 mRNA 0.41 3 10338539 10343205

Neighbor

gene id symbol gene type direction distance location
LOC110502262 LOC106604523 coding downstream 10356 10310776 ~ 10328183 (-)
LOC110502263 LOC106604517 coding downstream 29701 10262066 ~ 10308838 (-)
LOC110502265 LOC106604528 coding downstream 122050 10209501 ~ 10216489 (-)
LOC110502266 LOC106604534 coding downstream 132340 10160479 ~ 10206199 (-)
LOC110502268 LOC106604541 coding downstream 184250 10140097 ~ 10154289 (-)
LOC110502261 LOC106604510 coding upstream 13487 10356692 ~ 10364503 (-)
LOC110502259 LOC106604487 coding upstream 53135 10396340 ~ 10425115 (-)
LOC110502258 lrrfip2 coding upstream 114108 10457313 ~ 10470536 (-)
cutc cutc coding upstream 142878 10486083 ~ 10492607 (-)
LOC110502255 kcnip2 coding upstream 163582 10506787 ~ 10603546 (-)
G1828263 NA non-coding downstream 159715 10178585 ~ 10178824 (-)
G1828262 NA non-coding downstream 160131 10178193 ~ 10178408 (-)
G1828083 NA non-coding downstream 200011 10137818 ~ 10138528 (-)
G1828066 NA non-coding downstream 212059 10112241 ~ 10126480 (-)
G1828357 NA non-coding upstream 30540 10373745 ~ 10374676 (-)
G1828365 NA non-coding upstream 44391 10387596 ~ 10387927 (-)
G1828561 NA non-coding upstream 99864 10443069 ~ 10443358 (-)
G1828562 NA non-coding upstream 100399 10443604 ~ 10444469 (-)
G1828563 NA non-coding upstream 101568 10444773 ~ 10444993 (-)
G1827761 NA other downstream 649695 9688457 ~ 9688844 (-)
G1827690 NA other downstream 793566 9544383 ~ 9544973 (-)
G1827656 NA other downstream 872049 9466070 ~ 9466490 (-)
LOC110512783 tcerg1l other downstream 913058 9406037 ~ 9611812 (-)
G1827339 NA other downstream 1178924 9159197 ~ 9159615 (-)
G1829417 LOC106604325 other upstream 859862 11203067 ~ 11203996 (-)
G1829918 NA other upstream 1390225 11733430 ~ 11733926 (-)
LOC118943913 drgx other upstream 1457478 11798161 ~ 11807866 (-)
LOC110502234 LOC106604225 other upstream 1574874 11907827 ~ 11953940 (-)
LOC110502269 LOC106604550 other upstream 2049758 12392924 ~ 12411810 (-)

Expression


Co-expression Network