XLOC_037376 (col18a1a)



Basic Information


Item Value
gene id XLOC_037376
gene name col18a1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 41821613 ~ 41979505 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00073542
ACTCTCATCAGCTGTTGCACCGGCGCGAGGATCTCCTCTCTCTGAAGCGGGAAAGTTTCATCCGATTCCCAACAACAATCCCATGTAGCTATCGGGACGGAGCAGTTTCACGAACTGAAATGGCAAGAAGGTGTCTCGCGGTTCTGGAGCGGTTCTTCTGCCTCGTGTTGATCTTGTCTCCGGTTGCATTACAGCAGAGAGAAGAAAGTGGAGTGTCGCTGTTGCAACTAATTGGCGATCCTCCACCCAACGGCGTCTCCAAAGTCTTCGACCAAGCAAACAGTCCTGGATATGTGTTTGGACCAAGCTCAAATGTGGGTCAGTCTGCTGCAGCCCACCTGCCCAATCCCTTCTACCGCGATTTCTCCCTCATCTTCAATATAAAACCCACATCCTCCAAGCCTGGCGTGATCTTCTCCATCACTGACCCCACTCAGAACATCATGTATGTTGGCGTGAAGCTGTCGGCGGTGGAAAGAGGCAAACAGTCCATTATCTTCTACTACACCGAGCCTGATTCGCAGAGCTCCTATGAGGCGGCCAGATTCTCTGTTTCCTCCATGTTGAACATATGGACGCGCTTTTCCATCAGCGTTTTGAACGAGCAGGTTTCTCTCTACTTTAACTGCGACTCGGATCCTCAGGTTGTCAATTTCGAGCGCTCGCCTGATGATATGGACATGGATGCTGGCGCTGGAGTGTTTGTGGGACATGCCAGTGGAGCAGACCCGGATAAGTTTTTGGGTGTTATTGGTGATCTGAGGGTGTCGAGAGACCCTGGGGCGGCTGAACGGCACTGTGAAGAAGAGGAGGATGACTATGCAACAGAGGCATCAGGTGATTACGGAGCAAGTGGAGATGGAGAGCAGCCATCACCAGTTCAGCCAACACCTCCATCATCTCGGCCAATCCAGCGGCCACCGGTGATTAGCAGGGATCCTATACAGCGGCCACCGGTGATTAGCAGGGAGCCTATACAGCAGACAGTTGCAAGAGGAGAGAAGGGTGACAGAGGGGAGAAGGGTGCTAAAGGTGACAGGGGTCTTGCTGGGCCAAAGGGTGATGTGGGGTCTGGATCAGTGTCTGGTGGAGGATCAAAAGGAGACAAGGGCGTCCCAGGAGAGAAAGGAATGAAGGGCACTTCTGGTTTTGGTTATCCTGGATCTAAGGGTGACCGTGGCCCCCCTGGACCTCCAGGACCTCCGGGTCCCCAAGGGCCCAGTGCAGAGGTAGAGGTGCGGGGCGATGGGTCAGTTGTGCAGAAAGTCACAGGACCAAGAGGACCACCTGGACCCCAAGGACCCCCTGGTCCCCCTGGACCTGAAGGGGAGCCGGGTGACCCTGGTGAAGATGGAAAAGCTGGCCAAGTTGGACCTTCTGGTTTTCCTGGAAATCCTGGGAATCCTGGACCCAAAGGAGATAAGggaGATCGAGGTGAAAGTCAGCCAGGACCCCGTGGGCCGCCTGGTCCTCCCGGCCCACCAGGACCCTCCTCTGGCTTTGATAGACCTACGTTTGTGGACATGGAGGGCTCTGGATTTGATATGGACAGTGTGCGGGCAGTGCCTGGTTTGCCTGGTCCACCTGGTCCTCCTGGTCCCCCTGGTCCCCCTGGCTCTGCATCTTCAGGCTCTGGTGGTTTTGGGCCACCTGGTCCTCCTGGGCAAAATGGGGCGCCAGGTCAGCCGggACTTTCGGGTGTACCAGGTGCTGATGGAAAACCAGGCTTACCTGGTCCAAAAGGAGAGAAGGGTGATGCCGGTGAGCTGGGCCTTCCTGGACCGGTGGGAGAGAAGGGTGCCAAAGGTTCTTCTGGTCCCCCTGGCACCACTGGGATTGGTGGGCCTGCTGGTCTTCCAGGACCAATTGGACCTATTGGACTTCCAGGACCACCTGGTCCTCCTGGACCAAGCTTTAATGTTGGTTTTgatgACATGGAAGGTTCTGGTGTTCACTTCAGTTCAGTACCTGGAGTAAGAGGACCAGTTGGAATCCcgGGGCCACCTGGTGTCCCAGGGCCACAGGGTCAGCCTGGATTCCCAGGGCTTCCTGGTGAGAAAGGCAGTTTAGGAGCTCAGGGAAATGATGGTCTTCCTGGTGCAGATGGCTTCCCTGGACCACAGGGACCAAAGGGCGACAAAGGAGAGCGAGGCGACAGGGGTGAACCTGGtcgagatggacatggtcatccAGGCCAACCAGGCCCTCCTGGACCACCTGGACAGATTATTTATCGCTACTCTGAACATTATGATGAAGTTGGAGGAACGGGGGCTCAGGGTGGTTCTGGTGTTCCTGGCCAAGCAGGATTCCCAGGCCCAATGGGACCAAAGGGTGACAGAGGTGAGCCTGGTCTTCCAGGCTATGACATTAAGGGGGAGAAAGGAGAACCTGGACTTATTCTTGGACCTGATGGAAATCCACTTTACCTTGGTGGATTGACAGGACAGAAGGGTGAGAGAGGTATTTCTGGACCAGTCGGACCTCCTGGTCCAGCAGGACCTCCTGGTGCAAAAGGTGAATTCGGAATGCCAGGCAGACCTGGTCGTCCAGGTGTGAACGGATATAAAGGAGAGAAGGGAGAGCCAAGTTCAGGCTCTGGATATGGTTACCCGGGTCCCCCTGGTCCCCCAGGACCCCCTGGTCCCCCCGGACCCGCTGTGCCCTTGGACAGATTTGGCAGATATGAAGATTATGCAAGGCTCTATCCAGctacgAAAGGAGAGAAAGGAGACCAAGGAGCTCCTGGCATTCCCGGATCGCCAGGTTTTTCCACAAACTTTGATATATATTCACTCAAGAATGAGATGAAGGGTGAGCGGGGAGAGTCTGGTCTTAAAGGAGAGAAAGGAGAACCAGGAGGTGGATTTTATGACCCTCGTTTTGGAGCTGTACAAGGACCACCAGGGAACCCAGGACCTGCTGGACCTAAAGGAGACTCAATCAGAGGCCCACCTGGACCCCAGGGCCCACCAGGAACACCCGGGGTTGGTTATGATGGTCGACCAGGTAATCCAGGACCTCCTGGACCACCTGGTCCACCAGGGTCCCCATCACTGCCAGGACCCTATAGGCCACCACTCAGTATTCCTGGACCTCCAGGTCCTCCTGGCCCACCTGGAATTCCTGGCACTGGATCAGGGGTGACTGTCCTGAGGTCTCATGACATAATGATTGCTACAGCACGCAGACAGACAGAAGGGACTCTGATTTACATTCTGGACAGAAACGATCTCTACCTCAGAGTTCGGGACGGTGTTAGACAAGTGATGCTTGGGGATTATAAACCTCTTTATGGAGAGCTGGACAATGAAGTGGCAGCAGTCCAGCCACCCCCTGTTGTTCACTATTCCCAGGACCACACGGCTAACAATGGCGCAGAGCAGATTTCTCCACCACACCAGCCTATTGATTTCCCAACGAGAGAGCAGGAGAACAGAAACCCCAACCCGCAACCTGACCCCCGATACCCGGATCCACGATACCCACCATACACTGACAACAGATACACCGATCCTGTAGAGCCCAACATCAGATATCCTGTTCAACCCGAGAGGAATCCAATCACTCCAGCCCGCCGTCCTATCCCTCCTGTCAATCAGCCAGGAGGCCACGCCCACACCCACACTTCCGGACCAGGGTTGCATCTTATTGCTCTGAATTCTCCACAAGTGGGCAACATGAGAGGCATTCGCGGGGCAGACTTCATGTGCTTCCAGCAGGCACGGGCCGTTGGCATGAAGGGAACGTTCAGAGCCTTCCTGTCCTCCAAACTCCAGGATCTCTACAGTATCGTCCGCAGATCTGACAGAGAGACATTACCAATTGTTAACCTAAAGGATCAAGTCCTCTTCAGCAGCTGGGAGTCTCTCTTCAGTGACTCAGAGAGCAGGATGAAGGACAATGCACCCATCTACTCGTTTGATGGCAGAGATGTCCTGAGGGACAGTGCCTGGCCAGAGAAGATGATTTGGCACGGATCGGATGGCAGGGGTCACAGGCAAACGGATAACTACTGCGAGACATGGAGGGCCGGAGACCGCGCTGTCACAGGCCTGGCCTCGTCCCTGCAGGCTGGTCAACTCCTCCAGCAGACCTCCAGCAGCTGCTCCAGCTCCTACATCGTGCTGTGCATCGAGAACAGCTACATGACACAGTCCAAGAAATAAAGCCGTCCGAAAGAGCCTTTGAAAACTCAACACTTCAGTCATACAGGCCCAGATTTTGCTCCAGTAGATGCCTGTATCTAATGAATGGAAATGTTAAAGAGTAAATTAAACTGAGTCTGCCTTAAGGAGAATTTGCCAGTCATCTATTCGCCGTAACGCCAAAGGTTGAACGTGGAGGTGTTTGCTCTTTCTCAGGGCACTGGCACATCTTTTTCAGGGGGTTAAACCAGAGAAGTGAGGCCAACTGAGgcagttttttttaactgtatccATATAAAATTTTGTATATGAATTGTTTGTcttctgtgttgttgtttttttttttttgaaaaatgtcttaATTGGTATATTTAACCaattttagctatatttttttgtgCAACCATTTTCCTTCAAGGTTATGTTGGATATCGAGGAGCAAACCTTGACATAGTTTTAGAATTTGAAAAGAGAAagtatttattttgcaataaagaGAGCTAAAATATGATTTGAAACCACAAAGCATATTTGTTTGCTATTTTAGCAAGCACATTTTTGCTACTTCAACAGATGTAAGACTGAAGTGTAGCTTATAAATGGCTGCTCTCTAAAAACCTCTAGTGGGCAAAGAGAAATGCCTTAAATAATTCAACGCTTACCCCTCAAGAGTGTTTTGTACAAAACAAATGATTTGATCTGTTGCATCTATGGAatcactgtgttttttttttctattgtgatTAATGTGAAATTTCATATGGACATCTGAGTGTCATTATTTTACTCTTCTGGTTGATTCCAGAAGTTTCCATGAGTAACGGGAATGGGAAGCTGAATAGtatttgtaacaaatattttaaggaaaaaaattcTGTTACTAAAAAATAGTGGTTACATGTCCCATAATTCAAAGGCATTGGTTGCATTCGGTGCTTTTTGCTGATGAAACAGCTGCTGACAGTGTTGTTTGGGAGAGACAGATGTGTTTTATGAAGACACTTTATCTTCTATCCATATGGAATTTCAGACACCTAATCCACTCTAGTGCTACTGATGTGTTCAGCACAACCCTGTGGGCTTctagtctttttttctttctttccttttgtaCTAGTATGTGCTGCATCATGTCTCGGAGGcactgacattttttatttttcattagccACAATAATTTTGGCACCACTTCTTGTGTATTAAAATCTATTTCCTTAAAACCTACACATATCTTAGACTATGTTGTCTGttcatgcacaatattaacaTATCGGATGTCGTTCACAAGCCATTTCATATCATGATTGTTTACTGTTCACTGActgtttactaaaaaaaaaaataaaggtacatTTTTCCTCTTCAAA
>TCONS_00073544
CTGGCTTGTGGGCTGATTGTGGTGACTTTACGGTGAGCCAGGGACGAGTCTGTCTGTACTCCTGAATGACTGCAAGTGAACATGATGGCTGAACTCAGGTTTTGGCTGTGCCTCTTTATTTTGGCATGCGTGAGGATACGCCACACACATGGCTGGTTCTGGTTTGATGACTCCAAGGAAATTGAGAAGGGCGTGCAGACACCAGCATACCTGACCACCGTAGGGCCCACATCCCTGCCGAGGACAGAACCATCCAGAACAACAGGTACAAGTGCTTCTGTAACTGAAGAGGTCGCGAAAGAGGTCAGTTTTGAAGGGGAACCGGAGGTCAGATCCAGGTCTGGATTGGGGATTGAGTCCGGATCCGGATCTGGATCATCCAGTTTTGAAAGACAGCATGAATATTTAACATCATCCGACAAAATTTGGGGTATTATTGATGACAATTCTAGTTTGCATAATCAAGTGACCAAAGTGGACCAGACGGATGGACTTGACCCAGCAAACAGTCGATTTAATGAAGGCGTTAATGTTTCTTTCACAAATATTACtgctaaaaataatgtaaatgagAGTAATTTTGCAGAGCATGCTAACACGACGTTGTATTCCTCTGAATACGCTGTCTCAGATAATGCACTAACCATTGAAAGCCAATTTTTAATAGCCAGCATGCCAGCATCCTTCGAACCCCTGCGCTGCTTGCCGGTCGATTCTGGTTTGCCGTTTTGCACCAGAAGGGGAGTGGAGAGTTTCTCTGTGCCAAATTTTCTAAATCAAAGCAGCGTGGAGGAAGTTCGGATGGTTTTGACCGAATGGGCATGGCTTTTGAGGTCAGGCTGTCATCATAGTTTGGAATGGTTTTTCTGCCTGCTGTTGACCCCGCGGTGTGGCCACTCTGGATCTCTGCTGCCCTGTCGCAGTTCTTGTGAGGTCCTGCAGGACAGTTGCTGGACACTCCTGGACGAGGGCCGCCTCCCTGTGGAGTGCAAATCTCTGCCTGAAGAGAAGCATGATGGGTATCGGTGCTTGTCAGTTAGTAACCTGAAAGAAGAAAGTGGAGTGTCGCTGTTGCAACTAATTGGCGATCCTCCACCCAACGGCGTCTCCAAAGTCTTCGACCAAGCAAACAGTCCTGGATATGTGTTTGGACCAAGCTCAAATGTGGGTCAGTCTGCTGCAGCCCACCTGCCCAATCCCTTCTACCGCGATTTCTCCCTCATCTTCAATATAAAACCCACATCCTCCAAGCCTGGCGTGATCTTCTCCATCACTGACCCCACTCAGAACATCATGTATGTTGGCGTGAAGCTGTCGGCGGTGGAAAGAGGCAAACAGTCCATTATCTTCTACTACACCGAGCCTGATTCGCAGAGCTCCTATGAGGCGGCCAGATTCTCTGTTTCCTCCATGTTGAACATATGGACGCGCTTTTCCATCAGCGTTTTGAACGAGCAGGTTTCTCTCTACTTTAACTGCGACTCGGATCCTCAGGTTGTCAATTTCGAGCGCTCGCCTGATGATATGGACATGGATGCTGGCGCTGGAGTGTTTGTGGGACATGCCAGTGGAGCAGACCCGGATAAGTTTTTGGGTGTTATTGGTGATCTGAGGGTGTCGAGAGACCCTGGGGCGGCTGAACGGCACTGTGAAGAAGAGGAGGATGACTATGCAACAGAGGCATCAGGTGATTACGGAGCAAGTGGAGATGGAGAGCAGCCATCACCAGTTCAGCCAACACCTCCATCATCTCGGCCAATCCAGCGGCCACCGGTGATTAGCAGGGATCCTATACAGCGGCCACCGGTGATTAGCAGGGAGCCTATACAGCAGACAGTTGCAAGAGGAGAGAAGGGTGACAGAGGGGAGAAGGGTGCTAAAGGTGACAGGGGTCTTGCTGGGCCAAAGGGTGATGTGGGGTCTGGATCAGTGTCTGGTGGAGGATCAAAAGGAGACAAGGGCGTCCCAGGAGAGAAAGGAATGAAGGGCACTTCTGGTTTTGGTTATCCTGGATCTAAGGGTGACCGTGGCCCCCCTGGACCTCCAGGACCTCCGGGTCCCCAAGGGCCCAGTGCAGAGGTAGAGGTGCGGGGCGATGGGTCAGTTGTGCAGAAAGTCACAGGACCAAGAGGACCACCTGGACCCCAAGGACCCCCTGGTCCCCCTGGACCTGAAGGGGAGCCGGGTGACCCTGGTGAAGATGGAAAAGCTGGCCAAGTTGGACCTTCTGGTTTTCCTGGAAATCCTGGGAATCCTGGACCCAAAGGAGATAAGggaGATCGAGGTGAAAGTCAGCCAGGACCCCGTGGGCCGCCTGGTCCTCCCGGCCCACCAGGACCCTCCTCTGGCTTTGATAGACCTACGTTTGTGGACATGGAGGGCTCTGGATTTGATATGGACAGTGTGCGGGCAGTGCCTGGTTTGCCTGGTCCACCTGGTCCTCCTGGTCCCCCTGGTCCCCCTGGCTCTGCATCTTCAGGCTCTGGTGGTTTTGGGCCACCTGGTCCTCCTGGGCAAAATGGGGCGCCAGGTCAGCCGggACTTTCGGGTGTACCAGGTGCTGATGGAAAACCAGGCTTACCTGGTCCAAAAGGAGAGAAGGGTGATGCCGGTGAGCTGGGCCTTCCTGGACCGGTGGGAGAGAAGGGTGCCAAAGGTTCTTCTGGTCCCCCTGGCACCACTGGGATTGGTGGGCCTGCTGGTCTTCCAGGACCAATTGGACCTATTGGACTTCCAGGACCACCTGGTCCTCCTGGACCAAGCTTTAATGTTGGTTTTgatgACATGGAAGGTTCTGGTGTTCACTTCAGTTCAGTACCTGGAGTAAGAGGACCAGTTGGAATCCcgGGGCCACCTGGTGTCCCAGGGCCACAGGGTCAGCCTGGATTCCCAGGGCTTCCTGGTGAGAAAGGCAGTTTAGGAGCTCAGGGAAATGATGGTCTTCCTGGTGCAGATGGCTTCCCTGGACCACAGGGACCAAAGGGCGACAAAGGAGAGCGAGGCGACAGGGGTGAACCTGGtcgagatggacatggtcatccAGGCCAACCAGGCCCTCCTGGACCACCTGGACAGATTATTTATCGCTACTCTGAACATTATGATGAAGTTGGAGGAACGGGGGCTCAGGGTGGTTCTGGTGTTCCTGGCCAAGCAGGATTCCCAGGCCCAATGGGACCAAAGGGTGACAGAGGTGAGCCTGGTCTTCCAGGCTATGACATTAAGGGGGAGAAAGGAGAACCTGGACTTATTCTTGGACCTGATGGAAATCCACTTTACCTTGGTGGATTGACAGGACAGAAGGGTGAGAGAGGTATTTCTGGACCAGTCGGACCTCCTGGTCCAGCAGGACCTCCTGGTGCAAAAGGTGAATTCGGAATGCCAGGCAGACCTGGTCGTCCAGGTGTGAACGGATATAAAGGAGAGAAGGGAGAGCCAAGTTCAGGCTCTGGATATGGTTACCCGGGTCCCCCTGGTCCCCCAGGACCCCCTGGTCCCCCCGGACCCGCTGTGCCCTTGGACAGATTTGGCAGATATGAAGATTATGCAAGGCTCTATCCAGctacgAAAGGAGAGAAAGGAGACCAAGGAGCTCCTGGCATTCCCGGATCGCCAGGTTTTTCCACAAACTTTGATATATATTCACTCAAGAATGAGATGAAGGGTGAGCGGGGAGAGTCTGGTCTTAAAGGAGAGAAAGGAGAACCAGGAGGTGGATTTTATGACCCTCGTTTTGGAGCTGTACAAGGACCACCAGGGAACCCAGGACCTGCTGGACCTAAAGGAGACTCAATCAGAGGCCCACCTGGACCCCAGGGCCCACCAGGAACACCCGGGGTTGGTTATGATGGTCGACCAGGTAATCCAGGACCTCCTGGACCACCTGGTCCACCAGGGTCCCCATCACTGCCAGGACCCTATAGGCCACCACTCAGTATTCCTGGACCTCCAGGTCCTCCTGGCCCACCTGGAATTCCTGGCACTGGATCAGGGGTGACTGTCCTGAGGTCTCATGACATAATGATTGCTACAGCACGCAGACAGACAGAAGGGACTCTGATTTACATTCTGGACAGAAACGATCTCTACCTCAGAGTTCGGGACGGTGTTAGACAAGTGATGCTTGGGGATTATAAACCTCTTTATGGAGAGCTGGACAATGAAGTGGCAGCAGTCCAGCCACCCCCTGTTGTTCACTATTCCCAGGACCACACGGCTAACAATGGCGCAGAGCAGATTTCTCCACCACACCAGCCTATTGATTTCCCAACGAGAGAGCAGGAGAACAGAAACCCCAACCCGCAACCTGACCCCCGATACCCGGATCCACGATACCCACCATACACTGACAACAGATACACCGATCCTGTAGAGCCCAACATCAGATATCCTGTTCAACCCGAGAGGAATCCAATCACTCCAGCCCGCCGTCCTATCCCTCCTGTCAATCAGCCAGGAGGCCACGCCCACACCCACACTTCCGGACCAGGGTTGCATCTTATTGCTCTGAATTCTCCACAAGTGGGCAACATGAGAGGCATTCGCGGGGCAGACTTCATGTGCTTCCAGCAGGCACGGGCCGTTGGCATGAAGGGAACGTTCAGAGCCTTCCTGTCCTCCAAACTCCAGGATCTCTACAGTATCGTCCGCAGATCTGACAGAGAGACATTACCAATTGTTAACCTAAAGGATCAAGTCCTCTTCAGCAGCTGGGAGTCTCTCTTCAGTGACTCAGAGAGCAGGATGAAGGACAATGCACCCATCTACTCGTTTGATGGCAGAGATGTCCTGAGGGACAGTGCCTGGCCAGAGAAGATGATTTGGCACGGATCGGATGGCAGGGGTCACAGGCAAACGGATAACTACTGCGAGACATGGAGGGCCGGAGACCGCGCTGTCACAGGCCTGGCCTCGTCCCTGCAGGCTGGTCAACTCCTCCAGCAGACCTCCAGCAGCTGCTCCAGCTCCTACATCGTGCTGTGCATCGAGAACAGCTACATGACACAGTCCAAGAAATAAAGCCGTCCGAAAGAGCCTTTGAAAACTCAACACTTCAGTCATACAGGCCCAGATTTTGCTCCAGTAGATGCCTGTATCTAATGAATGGAAATGTTAAAGAGTAAATTAAACTGAGTCTGCCTTAAGGAGAATTTGCCAGTCATCTATTCGCCGTAACGCCAAAGGTTGAACGTGGAGGTGTTTGCTCTTTCTCAGGGCACTGGCACATCTTTTTCAGGGGGTTAAACCAGAGAAGTGAGGCCAACTGAGgcagttttttttaactgtatccATATAAAATTTTGTATATGAATTGTTTGTcttctgtgttgttgtttttttttttttgaaaaatgtcttaATTGGTATATTTAACCaattttagctatatttttttgtgCAACCATTTTCCTTCAAGGTTATGTTGGATATCGAGGAGCAAACCTTGACATAGTTTTAGAATTTGAAAAGAGAAagtatttattttgcaataaagaGAGCTAAAATATGATTTGAAACCACAAAGCATATTTGTTTGCTATTTTAGCAAGCACATTTTTGCTACTTCAACAGATGTAAGACTGAAGTGTAGCTTATAAATGGCTGCTCTCTAAAAACCTCTAGTGGGCAAAGAGAAATGCCTTAAATAATTCAACGCTTACCCCTCAAGAGTGTTTTGTACAAAACAAATGATTTGATCTGTTGCATCTATGGAatcactgtgttttttttttctattgtgatTAATGTGAAATTTCATATGGACATCTGAGTGTCATTATTTTACTCTTCTGGTTGATTCCAGAAGTTTCCATGAGTAACGGGAATGGGAAGCTGAATAGtatttgtaacaaatattttaaggaaaaaaattcTGTTACTAAAAAATAGTGGTTACATGTCCCATAATTCAAAGGCATTGGTTGCATTCGGTGCTTTTTGCTGATGAAACAGCTGCTGACAGTGTTGTTTGGGAGAGACAGATGTGTTTTATGAAGACACTTTATCTTCTATCCATATGGAATTTCAGACACCTAATCCACTCTAGTGCTACTGATGTGTTCAGCACAACCCTGTGGGCTTctagtctttttttctttctttccttttgtaCTAGTATGTGCTGCATCATGTCTCGGAGGcactgacattttttatttttcattagccACAATAATTTTGGCACCACTTCTTGTGTATTAAAATCTATTTCCTTAAAACCTACACATATCTTAGACTATGTTGTCTGttcatgcacaatattaacaTATCGGATGTCGTTCACAAGCCATTTCATATCATGATTGTTTACTGTTCACTGActgtttactaaaaaaaaaaataaaggtacatTTTTCCTCTTCAAA
>TCONS_00073543
CTGGCTTGTGGGCTGATTGTGGTGACTTTACGGTGAGCCAGGGACGAGTCTGTCTGTACTCCTGAATGACTGCAAGTGAACATGATGGCTGAACTCAGGTTTTGGCTGTGCCTCTTTATTTTGGCATGCGTGAGGATACGCCACACACATGGCTGGTTCTGGTTTGATGACTCCAAGGAAATTGAGAAGGGCGTGCAGACACCAGCATACCTGACCACCGTAGGGCCCACATCCCTGCCGAGGACAGAACCATCCAGAACAACAGAAGAAAGTGGAGTGTCGCTGTTGCAACTAATTGGCGATCCTCCACCCAACGGCGTCTCCAAAGTCTTCGACCAAGCAAACAGTCCTGGATATGTGTTTGGACCAAGCTCAAATGTGGGTCAGTCTGCTGCAGCCCACCTGCCCAATCCCTTCTACCGCGATTTCTCCCTCATCTTCAATATAAAACCCACATCCTCCAAGCCTGGCGTGATCTTCTCCATCACTGACCCCACTCAGAACATCATGTATGTTGGCGTGAAGCTGTCGGCGGTGGAAAGAGGCAAACAGTCCATTATCTTCTACTACACCGAGCCTGATTCGCAGAGCTCCTATGAGGCGGCCAGATTCTCTGTTTCCTCCATGTTGAACATATGGACGCGCTTTTCCATCAGCGTTTTGAACGAGCAGGTTTCTCTCTACTTTAACTGCGACTCGGATCCTCAGGTTGTCAATTTCGAGCGCTCGCCTGATGATATGGACATGGATGCTGGCGCTGGAGTGTTTGTGGGACATGCCAGTGGAGCAGACCCGGATAAGTTTTTGGGTGTTATTGGTGATCTGAGGGTGTCGAGAGACCCTGGGGCGGCTGAACGGCACTGTGAAGAAGAGGAGGATGACTATGCAACAGAGGCATCAGGTGATTACGGAGCAAGTGGAGATGGAGAGCAGCCATCACCAGTTCAGCCAACACCTCCATCATCTCGGCCAATCCAGCGGCCACCGGTGATTAGCAGGGATCCTATACAGCGGCCACCGGTGATTAGCAGGGAGCCTATACAGCAGACAGTTGCAAGAGGAGAGAAGGGTGACAGAGGGGAGAAGGGTGCTAAAGGTGACAGGGGTCTTGCTGGGCCAAAGGGTGATGTGGGGTCTGGATCAGTGTCTGGTGGAGGATCAAAAGGAGACAAGGGCGTCCCAGGAGAGAAAGGAATGAAGGGCACTTCTGGTTTTGGTTATCCTGGATCTAAGGGTGACCGTGGCCCCCCTGGACCTCCAGGACCTCCGGGTCCCCAAGGGCCCAGTGCAGAGGTAGAGGTGCGGGGCGATGGGTCAGTTGTGCAGAAAGTCACAGGACCAAGAGGACCACCTGGACCCCAAGGACCCCCTGGTCCCCCTGGACCTGAAGGGGAGCCGGGTGACCCTGGTGAAGATGGAAAAGCTGGCCAAGTTGGACCTTCTGGTTTTCCTGGAAATCCTGGGAATCCTGGACCCAAAGGAGATAAGggaGATCGAGGTGAAAGTCAGCCAGGACCCCGTGGGCCGCCTGGTCCTCCCGGCCCACCAGGACCCTCCTCTGGCTTTGATAGACCTACGTTTGTGGACATGGAGGGCTCTGGATTTGATATGGACAGTGTGCGGGCAGTGCCTGGTTTGCCTGGTCCACCTGGTCCTCCTGGTCCCCCTGGTCCCCCTGGCTCTGCATCTTCAGGCTCTGGTGGTTTTGGGCCACCTGGTCCTCCTGGGCAAAATGGGGCGCCAGGTCAGCCGggACTTTCGGGTGTACCAGGTGCTGATGGAAAACCAGGCTTACCTGGTCCAAAAGGAGAGAAGGGTGATGCCGGTGAGCTGGGCCTTCCTGGACCGGTGGGAGAGAAGGGTGCCAAAGGTTCTTCTGGTCCCCCTGGCACCACTGGGATTGGTGGGCCTGCTGGTCTTCCAGGACCAATTGGACCTATTGGACTTCCAGGACCACCTGGTCCTCCTGGACCAAGCTTTAATGTTGGTTTTgatgACATGGAAGGTTCTGGTGTTCACTTCAGTTCAGTACCTGGAGTAAGAGGACCAGTTGGAATCCcgGGGCCACCTGGTGTCCCAGGGCCACAGGGTCAGCCTGGATTCCCAGGGCTTCCTGGTGAGAAAGGCAGTTTAGGAGCTCAGGGAAATGATGGTCTTCCTGGTGCAGATGGCTTCCCTGGACCACAGGGACCAAAGGGCGACAAAGGAGAGCGAGGCGACAGGGGTGAACCTGGtcgagatggacatggtcatccAGGCCAACCAGGCCCTCCTGGACCACCTGGACAGATTATTTATCGCTACTCTGAACATTATGATGAAGTTGGAGGAACGGGGGCTCAGGGTGGTTCTGGTGTTCCTGGCCAAGCAGGATTCCCAGGCCCAATGGGACCAAAGGGTGACAGAGGTGAGCCTGGTCTTCCAGGCTATGACATTAAGGGGGAGAAAGGAGAACCTGGACTTATTCTTGGACCTGATGGAAATCCACTTTACCTTGGTGGATTGACAGGACAGAAGGGTGAGAGAGGTATTTCTGGACCAGTCGGACCTCCTGGTCCAGCAGGACCTCCTGGTGCAAAAGGTGAATTCGGAATGCCAGGCAGACCTGGTCGTCCAGGTGTGAACGGATATAAAGGAGAGAAGGGAGAGCCAAGTTCAGGCTCTGGATATGGTTACCCGGGTCCCCCTGGTCCCCCAGGACCCCCTGGTCCCCCCGGACCCGCTGTGCCCTTGGACAGATTTGGCAGATATGAAGATTATGCAAGGCTCTATCCAGctacgAAAGGAGAGAAAGGAGACCAAGGAGCTCCTGGCATTCCCGGATCGCCAGGTTTTTCCACAAACTTTGATATATATTCACTCAAGAATGAGATGAAGGGTGAGCGGGGAGAGTCTGGTCTTAAAGGAGAGAAAGGAGAACCAGGAGGTGGATTTTATGACCCTCGTTTTGGAGCTGTACAAGGACCACCAGGGAACCCAGGACCTGCTGGACCTAAAGGAGACTCAATCAGAGGCCCACCTGGACCCCAGGGCCCACCAGGAACACCCGGGGTTGGTTATGATGGTCGACCAGGTAATCCAGGACCTCCTGGACCACCTGGTCCACCAGGGTCCCCATCACTGCCAGGACCCTATAGGCCACCACTCAGTATTCCTGGACCTCCAGGTCCTCCTGGCCCACCTGGAATTCCTGGCACTGGATCAGGGGTGACTGTCCTGAGGTCTCATGACATAATGATTGCTACAGCACGCAGACAGACAGAAGGGACTCTGATTTACATTCTGGACAGAAACGATCTCTACCTCAGAGTTCGGGACGGTGTTAGACAAGTGATGCTTGGGGATTATAAACCTCTTTATGGAGAGCTGGACAATGAAGTGGCAGCAGTCCAGCCACCCCCTGTTGTTCACTATTCCCAGGACCACACGGCTAACAATGGCGCAGAGCAGATTTCTCCACCACACCAGCCTATTGATTTCCCAACGAGAGAGCAGGAGAACAGAAACCCCAACCCGCAACCTGACCCCCGATACCCGGATCCACGATACCCACCATACACTGACAACAGATACACCGATCCTGTAGAGCCCAACATCAGATATCCTGTTCAACCCGAGAGGAATCCAATCACTCCAGCCCGCCGTCCTATCCCTCCTGTCAATCAGCCAGGAGGCCACGCCCACACCCACACTTCCGGACCAGGGTTGCATCTTATTGCTCTGAATTCTCCACAAGTGGGCAACATGAGAGGCATTCGCGGGGCAGACTTCATGTGCTTCCAGCAGGCACGGGCCGTTGGCATGAAGGGAACGTTCAGAGCCTTCCTGTCCTCCAAACTCCAGGATCTCTACAGTATCGTCCGCAGATCTGACAGAGAGACATTACCAATTGTTAACCTAAAGGATCAAGTCCTCTTCAGCAGCTGGGAGTCTCTCTTCAGTGACTCAGAGAGCAGGATGAAGGACAATGCACCCATCTACTCGTTTGATGGCAGAGATGTCCTGAGGGACAGTGCCTGGCCAGAGAAGATGATTTGGCACGGATCGGATGGCAGGGGTCACAGGCAAACGGATAACTACTGCGAGACATGGAGGGCCGGAGACCGCGCTGTCACAGGCCTGGCCTCGTCCCTGCAGGCTGGTCAACTCCTCCAGCAGACCTCCAGCAGCTGCTCCAGCTCCTACATCGTGCTGTGCATCGAGAACAGCTACATGACACAGTCCAAGAAATAAAGCCGTCCGAAAGAGCCTTTGAAAACTCAACACTTCAGTCATACAGGCCCAGATTTTGCTCCAGTAGATGCCTGTATCTAATGAATGGAAATGTTAAAGAGTAAATTAAACTGAGTCTGCCTTAAGGAGAATTTGCCAGTCATCTATTCGCCGTAACGCCAAAGGTTGAACGTGGAGGTGTTTGCTCTTTCTCAGGGCACTGGCACATCTTTTTCAGGGGGTTAAACCAGAGAAGTGAGGCCAACTGAGgcagttttttttaactgtatccATATAAAATTTTGTATATGAATTGTTTGTcttctgtgttgttgtttttttttttttgaaaaatgtcttaATTGGTATATTTAACCaattttagctatatttttttgtgCAACCATTTTCCTTCAAGGTTATGTTGGATATCGAGGAGCAAACCTTGACATAGTTTTAGAATTTGAAAAGAGAAagtatttattttgcaataaagaGAGCTAAAATATGATTTGAAACCACAAAGCATATTTGTTTGCTATTTTAGCAAGCACATTTTTGCTACTTCAACAGATGTAAGACTGAAGTGTAGCTTATAAATGGCTGCTCTCTAAAAACCTCTAGTGGGCAAAGAGAAATGCCTTAAATAATTCAACGCTTACCCCTCAAGAGTGTTTTGTACAAAACAAATGATTTGATCTGTTGCATCTATGGAatcactgtgttttttttttctattgtgatTAATGTGAAATTTCATATGGACATCTGAGTGTCATTATTTTACTCTTCTGGTTGATTCCAGAAGTTTCCATGAGTAACGGGAATGGGAAGCTGAATAGtatttgtaacaaatattttaaggaaaaaaattcTGTTACTAAAAAATAGTGGTTACATGTCCCATAATTCAAAGGCATTGGTTGCATTCGGTGCTTTTTGCTGATGAAACAGCTGCTGACAGTGTTGTTTGGGAGAGACAGATGTGTTTTATGAAGACACTTTATCTTCTATCCATATGGAATTTCAGACACCTAATCCACTCTAGTGCTACTGATGTGTTCAGCACAACCCTGTGGGCTTctagtctttttttctttctttccttttgtaCTAGTATGTGCTGCATCATGTCTCGGAGGcactgacattttttatttttcattagccACAATAATTTTGGCACCACTTCTTGTGTATTAAAATCTATTTCCTTAAAACCTACACATATCTTAGACTATGTTGTCTGttcatgcacaatattaacaTATCGGATGTCGTTCACAAGCCATTTCATATCATGATTGTTTACTGTTCACTGActgtttactaaaaaaaaaaataaaggtacatTTTTCCTCTTCAAA

Function


symbol description
col18a1a Predicted to be an extracellular matrix structural constituent. Acts upstream of or within neural crest cell migration. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including anterior neural keel; digestive system; nervous system; neural plate; and pronephros. Human ortholog(s) of this gene implicated in primary angle-closure glaucoma. Orthologous to human COL18A1 (collagen type XVIII alpha 1 chain).

GO:

id name namespace
GO:0001755 neural crest cell migration biological_process
GO:0030198 extracellular matrix organization biological_process
GO:0031012 extracellular matrix cellular_component
GO:0005581 collagen trimer cellular_component
GO:0005615 extracellular space cellular_component
GO:0005201 extracellular matrix structural constituent molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030516-3 Predicted to be an extracellular matrix structural constituent. Acts upstream of or within neural crest cell migration. Predicted to be part of collagen trimer. Predicted to be active in extracellular matrix and extracellular space. Is expressed in several structures, including anterior neural keel; digestive system; nervous system; neural plate; and pronephros. Human ortholog(s) of this gene implicated in primary angle-closure glaucoma. Orthologous to human COL18A1 (collagen type XVIII alpha 1 chain).

Ensembl:

ensembl_id ENSDARG00000036558

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00073542 False 5515 mRNA 0.50 42 41821613 41979505
TCONS_00073544 False 6365 mRNA 0.50 41 41914378 41979505
TCONS_00073543 True 5579 mRNA 0.50 41 41914378 41979505

Neighbor


gene id symbol gene type direction distance location
XLOC_037375 BX927363.1 coding upstream 15258 41788217 ~ 41806355 (+)
XLOC_037373 ctdsp1 coding upstream 80193 41690153 ~ 41741420 (+)
XLOC_037374 dre-mir-26a-1 coding upstream 88003 41733533 ~ 41733610 (+)
XLOC_037372 dre-mir-732 coding upstream 138603 41682926 ~ 41683010 (+)
XLOC_037371 spegb coding upstream 140560 41612642 ~ 41681053 (+)
XLOC_037377 BX247868.1 coding downstream 10581 41990086 ~ 42038319 (+)
XLOC_037378 pcbp3 coding downstream 61052 42040557 ~ 42127228 (+)
XLOC_037379 NA coding downstream 122696 42102201 ~ 42108086 (+)
XLOC_037380 lrrc3 coding downstream 178073 42157578 ~ 42164744 (+)
XLOC_037381 NA coding downstream 178871 42158376 ~ 42158616 (+)
XLOC_037369 BX571827.3 non-coding upstream 222786 41509948 ~ 41598827 (+)
XLOC_037370 BX571827.2 non-coding upstream 228003 41593496 ~ 41593610 (+)
XLOC_037383 NA non-coding downstream 369453 42348958 ~ 42500284 (+)
XLOC_037385 NA non-coding downstream 752694 42732199 ~ 42905622 (+)

Expression



Co-expression Network