LOC110502296 (nanp)


Basic Information

Item Value
gene id LOC110502296
gene name nanp
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 13403547 ~ 13405114 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580219.2
CTACACCTCCCATAATGCGTTTCTTTATTGCCAACATTTCCGCATTGAAGACATGcatttacagtagctagctagtaactTGTTTCGCCGTATAAAAGctatactaacattacatttCTTTGTAACCTGTTGATAGCGGCAATGAACAGTGAAGGTATCAAGGCGATATTGCTCGACTTGGATAACACGCTCATTGACACAGCGGGTGCCGGTGGAGTGGCCATTCAAAAAGTCACAGAGCTCTTGAAGACAACATTAGACCATGAACACACCATTGCCATTTGTGACAGATTTAAGCACAAGCTCCATCACGAGACCTTTGACCCAGCTGGTGGTAGGACAATAGATGAGGTGCGGATCAGCCACTGGGAGGAGAGCATCCAGGAGGTTATGGGTGGGAGTCCCAGCTCTAACCCCACCCTTGCCAGTGAGTGCTACTACCAATGGAAGAACACTCGCCTGGAGCTTCTAACCATAACACCTCCAGTACTTACCCTGCTGAAGCAGCTGAGGACCAGCCACAAACTGCTGCTGCTGACCAATGGAGAGACCCAGACACAGAGGGAGAAGGTAGTGGCGTTGGGGTGTCAGGGGCTGTTTGatgctgtggtggtggggggagagCATGCAGAAGAGAAGCCAGCCCGCTCCATCTTCACCCATTGCTTTGGCCTGCTCGCGGTGCAGGCTCACGACTGTGTTATGGTGGGAGACTCCCTGGACACAGACATTGTCGGGGGGTTTAATGCAGGGGTTAGAGCCACAGTGTGGATTAATAACGGAGGGGTGTGTCCACCTGAGGGATCTGTCAATCCAGACTACACCATTCCCTCTGTGCTGGATTTACCTGAGGTGCTGGCCAAGTTGAAGTGAAAGTACAGGGAACAATGTCTAAACCAATCACATGAAGATTGTTTCCAAAGGCCTGAGTTAatgaaaacaattttttttttgtaaaagggATTGTCAAAATCATCTTATTTTCTTTCATATTCAATCTGGATGAAAGACAAAATTACTTTACAGCAACAATTATTTGCTTACCTACCAAAATTCTGTTTCATTGTTCATCGTCTCTACTCTCTAATGCAGCTAATGTATAATTCTGTCATTTTATGTTATCTGTTGGTGGAGGTAGGTATTACATATAGTTTACTGGAAATATGAAGCTGAAGCCTGTGCACAGGTCCGAAACAACTGAGCCACTTGAATGTGTCGTGATTGTCATTCCGAAAAGTAACGTCTACTTAGTCTAAATGTCAAAACTCACTTTCCCTAGTGGTCACATGAATCAACTTTGTCTAATGCTTAAAGTACACCatcaaagtgtattttcttacAGAATGTCACTCTAAATAGACTGATTTACAGTATTGTATGCTGATAAATACtctgagggaaaatgtacttga

Function

symbol description
nanp Predicted to enable hydrolase activity. Orthologous to human NANP (N-acetylneuraminic acid phosphatase).

NR:

description
N-acylneuraminate-9-phosphatase

GO: NA

KEGG:

id description
K01097 NANP; N-acylneuraminate-9-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580219.2 True 1412 mRNA 0.44 2 13403547 13405114

Neighbor

gene id symbol gene type direction distance location
fignl1 fignl1 coding downstream 42445 13351346 ~ 13361102 (-)
mocos LOC106604730 coding downstream 206354 13169146 ~ 13197193 (-)
LOC110502288 abhd12 coding downstream 235668 13148827 ~ 13167879 (-)
LOC110502284 tm9s3 coding downstream 257197 13123422 ~ 13146350 (-)
sfxn4 sfxn4 coding downstream 287517 13099167 ~ 13116030 (-)
LOC110502298 LOC106604820 coding upstream 82980 13488094 ~ 13549306 (-)
LOC110502303 LOC106604861 coding upstream 269349 13674463 ~ 13710049 (-)
LOC118943841 NA coding upstream 297429 13702543 ~ 13703759 (-)
LOC110502305 marh5 coding upstream 354539 13759653 ~ 13824191 (-)
LOC110502306 LOC106604898 coding upstream 485884 13890998 ~ 13944830 (-)
G1832483 NA non-coding downstream 6239 13396802 ~ 13397308 (-)
G1832482 NA non-coding downstream 7593 13391640 ~ 13395954 (-)
G1832480 NA non-coding downstream 14249 13389011 ~ 13389298 (-)
G1832473 NA non-coding downstream 21627 13381718 ~ 13381920 (-)
G1832472 NA non-coding downstream 21914 13381388 ~ 13381633 (-)
G1832590 NA non-coding upstream 154976 13560090 ~ 13560389 (-)
G1832558 NA non-coding upstream 267402 13672516 ~ 13685923 (-)
G1832769 NA non-coding upstream 470564 13875678 ~ 13877676 (-)
G1832798 NA non-coding upstream 549284 13954398 ~ 13954643 (-)
LOC110502308 blnk non-coding upstream 562536 13967514 ~ 14061826 (-)
LOC110502275 LOC106604599 other downstream 813847 12580816 ~ 12651383 (-)
LOC110502269 LOC106604550 other downstream 1007900 12392924 ~ 12411810 (-)
LOC110502234 LOC106604225 other downstream 1449914 11907827 ~ 11953940 (-)
LOC118943913 drgx other downstream 1600416 11798161 ~ 11807866 (-)
G1829918 NA other downstream 1669621 11733430 ~ 11733926 (-)
G1833570 NA other upstream 1115235 14520349 ~ 14520929 (-)
G1834810 NA other upstream 1761095 15166209 ~ 15166919 (-)
G1834927 NA other upstream 2093640 15498754 ~ 15500261 (-)
tmem254 cj057 other upstream 2261089 15666203 ~ 15671223 (-)
G1835092 NA other upstream 2340524 15745638 ~ 15747735 (-)

Expression


Co-expression Network