LOC110502312 (kndc1)


Basic Information

Item Value
gene id LOC110502312
gene name kndc1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 14376236 ~ 14467063 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580246.2
AGTTCATTATCGCAATGTCGGTTATTTTTGTGGAGGTGTGGCAGTCGTTGCCATGACAGCATATAGTTGGCAAACTCCGTTGTTGCCATTGATTATAGGAAGTACACATTCAAACGCTGTTTTTCGCTGGTTTTGGATTGAAAAGAACTGCAGTGACACCGACCGTTTTGTTGAATGACGCATCATGTTGCTGGTGGTAGTGGAAGGACGGGGATCATTCTAAAAAGTAGCCCGCACTGTTCGTGTTTGGACCACGTATTCAGGCATGTAATCTTTCCTGACTCAATACAGTTTTGCCAGGACACCAATGGAGGAAAAGCTTTAGGCTAAGGGCTATGAGTATGAAACTGCACGCACCCAATTCTACAAATATCCACAGTCTTGTTCAAAACTAAATACAATGGGGACATCTGGAACTGATGCAGTCGAATTCtcaggggaagaagaggaggaatacTATGAATTTGAGCATCTACCTGCACTCCTTGAAGATGAGGAGAACGTGTCCCTGGCAGATATCCTGTCGTTGCGGGACACCTGTCTGACGGAGCAGGAGGTGTGGgcggtgtgtgtggagtgtgtccTAGCCTTGCAGAGTATCGCCCCATCGACCCTCTTCCACACCCTGTGCATCACACCCGACACCCTGGCCTTCAACGCCCATGGCAATGTGTGCTTTATGGAGCAACTCAGTGATGATCCTGAGGGATCGTTTATACCTCCAGAGTTTGACAAGACTGGCAGTACCTTTGAGGGACACATGTACTCTCTAGGTTCCACCCTCTCTGCTGCGCTGGACTTTGTCATTGAGCCAGAactggaggcagagctgggggAGGAGATTCAGAGACTGCTGGAGCAGATGCAGGAGAAGGGGCCAGAGGACAGGCCACACCCCCAGGACATCCTATCCCTTGCAGAGGAAAAGCTAGAACATACCTCTTCCACAGTCCTGTGCCGGAAACTCTCTTCTATAGGAAGAAGAGTCCTGTCAATCGAATCCGTTGCAACATTTCAAGATGGGTGGGATGGCTCTTGGGAGGCTCGATGGCAGCAGCCCCAACCCAACTGGCAGCTCCACAAGAGCATCAGCTCTGAGGACAGTAGCTTCAAAGACCAGTGCATTGTCTCAGACACCACGGCTGAGAATCCAGACCCAAACGATCCCAATGGAACTCTCCGACATCACGTATGTGGGTCCTGGGACTCCACCCTGTGGGCTGATGGTATGGGGGATGTGGAAGAGGATGGATGTGTCATAGAGGAGGACGTGTTTGGTTCGCAGTTGGATAGCAGATCTCAGAACAGTTCCCCTGTACGAAGGAGGGCTCAGGAGAGGGCTGGGAGGGTGAGGGGGGTTCTGAATCGTTCCTGCTCTGTCCCAGACTCCAATAATCCACCCACACACCCGCCAACGCCCCACGAGGATATCAGTGTCAATGTATCGGACCTCACGGAGATAGGAGCTGAGGAATGCATGGGGCACGGGTCTGTTTGGAgcaagagaggggatagagagacagcCCCTTATGAGTGCAGTGACTCCAAGCAATGGGGCTCAGTGAGAGACAATGAGATGTCAGAAGGGGACAGACATTCTCACATGCCCAGATGTGGCGATAAAACAGATTCAGACGGTCAAAGTGGAACACGTGATGATCCCACTTTGGCCCGCCCAGCTCAAGACCCAGAAGTGTCGGTTGACTCTGCCTGCAACATGACTTTAAACTCAAACCTTTACACTCCAAATAATCACATGACTAAAAGCATGCTGTGCCTCAATGAAGAATCACAAGATGAGTGGATCTCTCTGAGGGATCTACTCACACGGAGTGGGCAGAGATGGTCTGTTAATGAGCTATGGGCCCTGTGTCATACCTGCCTCTCCACACTGCAGACGTACATAGACTACCCAGCATACTTATGCTTGGACACAGTGTACGTGGGTTGTGAGGGAGAAGTTCTCTTCTTGAAACCTAAAAACACAGGATCCTGTGATGCATTTTATCTGGCGCCTGAATTCCAGGAGCATGGAATCGTAACTGAAAAGGCCTGTGTCTATGGGGTGGCTGCCATCTTATGGGCCACTGCCAAGTTCAATCTGTCAGCCAACCAAAAACTGGCTATGCCCAGGAAGTTGAAGAGGCTGCTGCTGGAGATGGCCAAGAAGACGCCCTTCGAGAGACCTTCCATTGTCATAGCTAAAAAGAGCTGTCGTGATTATCTATCATGCCAAGGAAAGAACGCTGAGACAGTGTGGACGAAGCTGATCAACAGAGTCCACCCGCCACTCACAAAGGACATTGATGCAGAGGATCAGAATGGATTGGACAGTAGAGGAAGCTCAAGTCAGGAATCAACACATATCATGAGTGGGTTTGTGCCCATGGCTACTGAGAGCCGATTGGCTCCTGTACCTGGCCCTGTTCCCCATAGCTATCCAATCAGTGGAGCCCCCCAGCTTCCAGAGGCCTTCACCTCCTCTGCCACACACTTCACCCCCATCGTCCTGACCAGGGAGGGGGACACTGAGGAAGAAACTCCCCTGTCTGCTTCAGACATTGAGGGGACTAGAGGCAGTGAGATCCAGCCTGTGCAAGAGGCCAAGCACCCAGAAACACCTTTACACCTTGAAGACCTACCCCTACCTCAGTCAGATAGAGACCTACAGGACAGCGGACAGGACAGCCCTGTAAATCAAAAGAATGTGGTCACACGTCATTCCTCCTCCACTGCCTCCAGCAGCAGGACATTGGTCAACTCTCCACCTCCCGCCTCCCCCGAACTGACCACCCAATTGTCTTTGTCTTCCTCTTGCCAATTGTCATCTTGCTCTCATCTGACTGGTGGTGGTGTTTTCAACAACTTCCTCTTGCGCCATGACCCACTAACAGGGGACCTAACCCTGGTGCCGGTGCAGATAACAGTCGCTGAGTCCCTCCATGGACTGGAGCTCAATCTGCCCCTGACCTCAAGCTCCAGCTTCTTTCAGGGTCAACCTACACATCCTGGGGGCCCTAGAGACCATCTGACCCCTGGTCAGGGAGCTGAACCCCTGCTGTCTTGCCTTAATGGAAGCACTTGCAGCAAACCCTTGGACTCCTTAGTGTCAATGTCCCAGCCCCATAATGGAGAGGAAAGTCGAAGGTCAGGAGAACGTGAGGATGAAGCCCTATCAGAGTCCCATGGACCTCCTCAGGGAGACTCCCATCTGATGCACCCTTCCCTACAGGAAGTTATTGGCCTGCTCAGGGCAGAGTTTGCCATTGATGGCTATCTGGAGAATGGTTTGGAGGATCTATCAATGGGGGAGTATATCCTGTCTCTGAAGGACCTACAGTACCAGACGTTCTGCAATGTTGTGAAAGAGAAGTTCTGTGACCTTTCCTGGGATGAGGACTTATTGGGAGTGCTCCACTGTGTGGTCAACTACAGCCAAttctctctAGGCTCTAATGAAGAGTCACCATCAAAGCCTTGGCAAAGGGCACCCATCTCACCTCTGAGTGCTGCtggctggagaggggaggagagggacgcACCCCGGCATGGTCATGTCGACCTGAATGGCAACCTGCACCACAGTGGACCTGTAGCTTCAGATGCATGGGAGAAAtgtcagagagaccagagaccccTGTCTACATACAGAGTAACAAAGACTAGACCTGAACATAGAGATGCCGTATCAGAGGAAGTTCAACATAATGGCTGCCCAGGATTGAGAGCTGCCGAGTGTTTGGGTAAAGGGGCCATGGAGAGTGCCGAGCATCCAGTGGGGGTCAGTGATGAAAGCCCCCCTGAAGCTGACTCTCTGTGTGGGATGGACGAGCCACTGAGGGTGGGCCACCTAGGCCAGATGAGCTGCTCCAAGGACATGGAGGAAACAGAATCGCTGGTGTTTGAGcgtctcctctccccctgctccaGAGCAGAGGAGTCTAGCCACCGCCTCAGCCCAGCCTGGGGCCTGGCCTTCTATGGAGAAGACTGTTTTAGTCATGATGTGGTGGAATATGCTATAACCCTGGGACAGCACAGTGAGTCACCGTGCCTGGAGCTGAAAACACAGGAGCTTCAACAGCAGCGCATGATCGAGATGAAGAATCTGAAAAAGACCCGGAATTTCTACCAAAAGCTGCTCCACcaagagagaaaaaataaagGTTCGGAGGCTAGATTGATGCTGTCCAAACTCAAGATCCAGTTTGAGGAGTTGAGGTCCAAAGTGGAGTTCCTAGACTGTGTAAAGAAATATCTTGAGGTTCTGAGTGTGGATCAGTGGGGTATGGATatgtccctcctcccctccctggcAGCATCTGGTCCAGGGAGCCCTCTGGATCTCCAGCCCTCAGAGGAGCCTGCCGTGCTGGGATTGGTATCTTTgtctggagcagagagagggaagagcagCCTGCAGGCCGCCACACCCCTGGGTCTCATGTCCTACCTCTATGCCAGAAATGCTCTATTGGAGGGCTACATCCAACAGTTCCTGTACACATACCGCTATTTCTGCACCCCTCAAGAACTCCTTCAGTTCCTGATGGAAAAATTCACCAGTGCTGTAGCAGCAGGAGGTGGTCCAAATGTGTCAGGGGACCGTGCTAAGGTGTACCATCGGAGTCTGGATGTGCTGCAAacctggctgactgactgcagACTGGTGGATTTCAGCCCCAAGTCCATCCTGCTGATCACACTGGAAAACTTCCTCACCAATGAAGTGTCTCCAGtagacagcagaggagagaggcttcTGGCCACTCTTCAGAGCTCTCCCAGGAGGAGGTGGAGCCAAAGCTGTGGGAGCCCAATCAGCATGCAGGAAGAAGATGATGCATTGTCTTCTCATACCATATGCAGAAAATCACATGTTGAGGACTCTGGAAAGAAGAGTTTCCAGTGGAAAATATCTAGGGTGGTGGAGCCCCAGGCAACCCAGACCAAAGACCAGGCCTACTCATTAGCAGCAGCCCTGCCGCGGCCCTGCTACACCTCCCTTATGGATGACATCTCCAGTGCCTGCCTCAGAAGCGAGGAAAGACACCCTTTTAGTCAGAGTGAACACAGCGCCCAACACACGGCACAGCAACTCACTCTACTGCAGCAGgaAATGTTTCAAGGCTGTCACCCCAATAATTTCCTCAACTCTAGAGCTCAAGGAGTCGGGGACAAAGCTTTTAGTGTCACCAAACATGTGTCACACTCTATACCTCCAGTAGAGGGCAGCAGTTTATTTGTTAATGAGGAGATGCCACAGGACAGCTACCTCCAACAGCTACTGAGATATGCTGACAGTGTCTCCAACTGGGTTTCTGCTGAAATTGTCATCTGTGATTCGATAAAGATACAAGCGGCTTTGCTCACCAAGTTTCTGTTAATTGCCAAACACTGCTATGAATCGAGAGACTTCGCCACGGCCATGCAGGTCCTTGGAGGTCTGGAGAATGTTTTTGTCAGGCAATTACCCGCTTGGAAACATCTGTCTACCAAGGTGTGTGAGGTCCTAGAGGAGCTGCGAGCCGTGcagGTCTTTCTGAAGAGTGATAACCTGTGCCTGATGGGAGGAGATCATGTGAGGAGGAGACCCACCCTCCCTGCTGCCCACATCCTGGCCATGCACATCCAGCAGCTGGAGATAGGAGCCTTCACTCTGACCAGCGGTGCCTATAAGTGGCCAAAACTTAGGACCATAGCGAAGGTGGTGAGTCAGGTACATGCGTTCCAGGATACAGTGTACTCCTTCACTCCTGACCTGGAGCTGCAGGCCTACCTAAGACTACGCATCGCCCACCTCAGCGGCTGTGATATCCCCCTGCTGGCTGCAGACAACGAGGCCAACTTCCACCACACCCCCACTGAGCGACACACCCGCAGGATCCAGGACACACTAAAGAGGGTGAAGGCCACCTTCCAATGAGCTACAGCCTtgcctgatctaggatcagatttgccttttagatcataatgaatacgatGATATGGACAAAGGGGAACTGGTCAAAGATCAGTACTCATAATGCTTTATGAAATTGGGCCCTGGTCAGACAACTAGTCAACAGACCCCAAACCCCCCATACCCCACTGAGTTACTTTGTTGGCAGAGACTGGGTGGGTGTCTCTATTTATTGGTAATAACTTTGATTAGACATCATGAGGGCGGTCTTATTTGAACACAATGACAGAGCCATATGAAGGCATCCAAGGTGGTTCATTTTGACTTCACTCTGATTTTATACAGTGAGCAGTCCAGCTCAATCCCCCACATTGCACCCCATAGCCTGACAACGCACTGCACACCTCTAACTCCTTGATTATCCAAAGTAGAGTACAAAGTCATCTGAAAAATATAATTGTTTATTTTGTTATTAgagtgagaagaggagaaaaCAGTAATGGACTTTTTAAGGGGAAGAACAGATATGCTTTTTTACTTGTGAAAAATGTCAACAACAGACTGAATGATTTTTAATAATTCACAACATCTTTATCTAGCACTGGTGGAGGCATATGGATCACATTTCTCTCTCATGTACACCATTTTGATTGCTAGTCTCTAAGACAACATAATAATGATAATGTTTCATAAAGAGATGACATCATGTCTTTAATTCACTGAGCGTCGTGTATTATAGCTCAATTAGATTTGAAAAGTGAGATATTTTGATATAACCACAGATAGGTGATTACCATTTTCAACTCTCCGAAGCACCATCTAAATGGTCTAAATGACCATCTATTGGCATTGCCAATAGCTACTTGACATGATAATTACAGTATTTCAAGATATTAAAAATGGATCAAACTGATGATGTAATATGCTATTACGGCTAAATCAGGGATGGGCAAACTGGCGGGTCGCGTGCCGCACCCCTTTTGTAGTTCCGGGATCAATTTctaagtatatatacagtactagtcaaacatttggacacgccaactcattcaagggtttttctttatttttactattatctacattgtacaat

Function

symbol description
kndc1 Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in cerebellar granule cell differentiation; positive regulation of protein phosphorylation; and regulation of dendrite morphogenesis. Predicted to be located in dendrite and neuronal cell body. Predicted to be part of guanyl-nucleotide exchange factor complex.

NR:

description
protein very KIND

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580246.2 True 6995 mRNA 0.50 30 14376236 14467063

Neighbor

gene id symbol gene type direction distance location
LOC110502308 blnk coding downstream 396466 13967514 ~ 14061826 (-)
LOC110502306 LOC106604898 coding downstream 431406 13890998 ~ 13944830 (-)
LOC110502305 marh5 coding downstream 552045 13759653 ~ 13824191 (-)
LOC110502303 LOC106604861 coding downstream 666187 13674463 ~ 13710049 (-)
LOC118943841 NA coding downstream 672477 13702543 ~ 13703759 (-)
LOC110502313 LOC106604940 coding upstream 29939 14497002 ~ 14757755 (-)
LOC118943949 NA coding upstream 62195 14529258 ~ 14529355 (-)
LOC110503081 LOC106604947 coding upstream 345377 14812440 ~ 14908222 (-)
LOC110502316 LOC106604996 coding upstream 700175 15167238 ~ 15189583 (-)
LOC110502317 LOC106605012 coding upstream 770569 15237632 ~ 15429967 (-)
G1833412 NA non-coding downstream 38211 14285687 ~ 14338025 (-)
G1833001 NA non-coding downstream 127122 14248772 ~ 14249114 (-)
G1832918 NA non-coding downstream 250233 14123338 ~ 14126003 (-)
G1832798 NA non-coding downstream 421593 13954398 ~ 13954643 (-)
G1833555 NA non-coding upstream 34632 14501695 ~ 14501931 (-)
G1833569 NA non-coding upstream 52501 14519564 ~ 14519813 (-)
G1833571 NA non-coding upstream 54709 14521772 ~ 14522012 (-)
G1833710 NA non-coding upstream 269211 14736274 ~ 14736507 (-)
G1833716 NA non-coding upstream 279745 14746808 ~ 14747171 (-)
LOC110502275 LOC106604599 other downstream 1786536 12580816 ~ 12651383 (-)
LOC110502269 LOC106604550 other downstream 1980589 12392924 ~ 12411810 (-)
LOC110502234 LOC106604225 other downstream 2422603 11907827 ~ 11953940 (-)
LOC118943913 drgx other downstream 2573105 11798161 ~ 11807866 (-)
G1829918 NA other downstream 2642310 11733430 ~ 11733926 (-)
G1833570 NA other upstream 53286 14520349 ~ 14520929 (-)
G1834810 NA other upstream 699146 15166209 ~ 15166919 (-)
G1834927 NA other upstream 1031691 15498754 ~ 15500261 (-)
tmem254 cj057 other upstream 1199140 15666203 ~ 15671223 (-)
G1835092 NA other upstream 1278575 15745638 ~ 15747735 (-)

Expression


Co-expression Network