XLOC_037379


Basic Information

Item Value
gene id XLOC_037379
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 42102201 ~ 42108086 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00075180
tcgggtgcgtaCCCAAATCTGCCTGGCTTCATGATCCACGCGAAATCTGGTCCAGTTCACTTCTGGTACTtctgaaccgccaactgtactaCAAACTATCTTTTTCCTAacaccattacaGCTGCCCTGCCAGAGAGAAACTGCATTGTTTTACCTGTGATTAATGAGAAAGAGAAAGCTTCCGCCGGCTCTCTTCCTGCATCTCTCTGTATTGATTTAAATGTTATTCTTATCCACCAATGACGTACAGGCCTGATCTCCTGCTGAGGTGGATTGGGCTCTGATTGGGTGTTATCGAATCCTTTTCATTTTTGGCTACTACAAAAACAGACATATACGTAATCGCTTTGCTGCGAACTTACAACAGACACCGCCTCATCCTCTGTGTGTGGCTAACATTTTGGGGCTTTTGTGCAATACACAACACACTGGactcattattatatttaaatacagtatgcATAATTTGAACTGTCACTGTCAGTGTGATGATTAAATTGAATGTAATcagcaaacagttttaatatacAAGTGCTAAATgcgttttttttatatttaacatatcCA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00075180 True 567 lncRNA 0.40 2 42102201 42108086

Neighbor

gene id symbol gene type direction distance location
XLOC_037377 BX247868.1 coding upstream 63882 41990086 ~ 42038319 (+)
XLOC_037376 col18a1a coding upstream 122696 41821613 ~ 41979505 (+)
XLOC_037375 BX927363.1 coding upstream 295846 41788217 ~ 41806355 (+)
XLOC_037373 ctdsp1 coding upstream 360781 41690153 ~ 41741420 (+)
XLOC_037380 lrrc3 coding downstream 49492 42157578 ~ 42164744 (+)
XLOC_037381 NA coding downstream 50290 42158376 ~ 42158616 (+)
XLOC_037382 si:dkey-10c21.1 coding downstream 160973 42269059 ~ 42270960 (+)
XLOC_037383 NA coding downstream 240872 42348958 ~ 42500284 (+)
XLOC_037384 gulp1a coding downstream 438418 42546504 ~ 42650623 (+)
XLOC_037374 dre-mir-26a-1 non-coding upstream 368591 41733533 ~ 41733610 (+)
XLOC_037372 dre-mir-732 non-coding upstream 419191 41682926 ~ 41683010 (+)
XLOC_037370 BX571827.2 non-coding upstream 508591 41593496 ~ 41593610 (+)
XLOC_037385 NA non-coding downstream 624113 42732199 ~ 42905622 (+)
XLOC_037386 CU855879.1 non-coding downstream 1223309 43331395 ~ 43331511 (+)
XLOC_037387 BX470133.1 non-coding downstream 1667165 43775251 ~ 43775365 (+)
XLOC_037369 BX571827.3 non-coding upstream 503374 41509948 ~ 41598827 (+)

Expression


Co-expression Network