Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502348 |
| gene name | LOC106605759 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 17027749 ~ 17096659 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036959853.1 | False | 7882 | mRNA | 0.52 | 46 | 17027749 | 17067514 |
| XM_036959854.1 | False | 7882 | mRNA | 0.52 | 46 | 17027749 | 17067514 |
| XM_036959849.1 | False | 7910 | mRNA | 0.52 | 46 | 17027749 | 17067515 |
| XM_036959850.1 | False | 7886 | mRNA | 0.52 | 46 | 17027749 | 17067515 |
| XM_036959847.1 | False | 7914 | mRNA | 0.52 | 46 | 17027749 | 17067516 |
| XM_036959852.1 | False | 7887 | mRNA | 0.52 | 46 | 17027749 | 17067516 |
| XM_036959848.1 | False | 7915 | mRNA | 0.52 | 46 | 17027749 | 17067517 |
| TU2103154 | False | 1439 | lncRNA | 0.39 | 2 | 17027758 | 17096659 |
| TU2103159 | True | 1341 | lncRNA | 0.40 | 2 | 17027856 | 17096659 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502346 | pkdcc | coding | downstream | 103770 | 16891354 ~ 16923979 (-) |
| LOC110502345 | eml4 | coding | downstream | 263707 | 16673409 ~ 16764042 (-) |
| LOC118943947 | NA | coding | downstream | 381317 | 16646380 ~ 16646432 (-) |
| trnai-uau-47 | NA | coding | downstream | 651776 | 16375880 ~ 16375973 (-) |
| LOC110502333 | LOC102778633 | coding | downstream | 1158698 | 15865071 ~ 15869051 (-) |
| LOC110502353 | LOC106605805 | coding | upstream | 352806 | 17420323 ~ 17425430 (-) |
| LOC110502354 | ncoa4 | coding | upstream | 376957 | 17444474 ~ 17453469 (-) |
| LOC118943816 | NA | coding | upstream | 387189 | 17454706 ~ 17471690 (-) |
| LOC110502357 | LOC106605561 | coding | upstream | 443843 | 17508036 ~ 17647588 (-) |
| LOC110502361 | LOC106605890 | coding | upstream | 657818 | 17725263 ~ 17781515 (-) |
| G1836473 | NA | non-coding | downstream | 54549 | 16972948 ~ 16973200 (-) |
| G1836472 | NA | non-coding | downstream | 54975 | 16971559 ~ 16972774 (-) |
| G1836470 | NA | non-coding | downstream | 58270 | 16969274 ~ 16969479 (-) |
| G1836466 | NA | non-coding | downstream | 61175 | 16966288 ~ 16966574 (-) |
| G1836461 | NA | non-coding | downstream | 66104 | 16961221 ~ 16961645 (-) |
| G1836631 | NA | non-coding | upstream | 30159 | 17097676 ~ 17097899 (-) |
| G1836633 | NA | non-coding | upstream | 32584 | 17100101 ~ 17100840 (-) |
| G1836642 | NA | non-coding | upstream | 38413 | 17105930 ~ 17106480 (-) |
| G1836644 | NA | non-coding | upstream | 40686 | 17108203 ~ 17108433 (-) |
| G1836652 | NA | non-coding | upstream | 51273 | 17118790 ~ 17119028 (-) |
| G1835092 | NA | other | downstream | 1280014 | 15745638 ~ 15747735 (-) |
| tmem254 | cj057 | other | downstream | 1356569 | 15666203 ~ 15671223 (-) |
| G1834927 | NA | other | downstream | 1527488 | 15498754 ~ 15500261 (-) |
| G1834810 | NA | other | downstream | 1860830 | 15166209 ~ 15166919 (-) |
| G1833570 | NA | other | downstream | 2506820 | 14520349 ~ 14520929 (-) |
| G1837980 | NA | other | upstream | 642255 | 17709772 ~ 17719204 (-) |
| LOC110502394 | LOC106606249 | other | upstream | 1782180 | 18849389 ~ 18854222 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | upstream | 2044525 | 19111958 ~ 19145332 (-) |
