LOC110502366 (LOC106605925)


Basic Information

Item Value
gene id LOC110502366
gene name LOC106605925
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 17815233 ~ 17828699 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580333.2
ATCTACATCGGATATACGTCATGTCTCCACAGCCACAATATCCGCAACAAGTTCGCTCGGATCTGGTGGTGTGAGGTTATATAGCTAGCTATATAGCTATCCCGCTAACGTGAGTTGTTTGAGTTTCCATATAACGTTAACCTAACATTTACCAATTAAACCACAAACTTGCAATAGTGAATACGTGCACCTTCATATATAGCAATATCAGAGATATGTACCCAGCTAGGATGGTAATCTAGCCAGCATTTCAACGTTCGCGTCCCCTTTGAAGAGTTCTTTCTGCTTACGTTAGCTtgcgagctagctagctttcataAAACATTTCGAAATGGGACGAGGAGGTGGTCGGAAGCGTGGAAAAGGCAATGGACCTCCTCCATTTGACATGGGACCAAGGCGGCCCCATCCATTTGACATGGGCCCAGGACCAGGTTGGTGTGGGCCGCCTGGACCTTTTGGTCCTTTTCACGGTGGCCCCGGTCCACATCCTAACTTTATGGGAGATCCAATGATGCAAGGCCCCATGCCCCCAGATTATCACAGATATGGGCCAGGCTATGGGCCAATGGGTCCAGGTGGCCCCATGGATGGATACGGGCCAAGAGGCCCCATGGATGGGTATGGGCCAATGGGTCCAGGTGGACCTATGGATGGATGTTTTGATGGGCCACCGATGGATGGGCCAGGATTCGGGTATGGTCCAGGTATGCCCGGACCATATGATCCAATGATGGGCAATGTACCAGGACCAATGCCCCCCCCAGTCATGGCCCCGCCAGTTATGCCCCCCCCAGGTATTCCACCCCCTGGTATTCCTCCCCCAGGTATGCCGCCCATGGTCCCACCTCTGGTGGACAACTCTGGCTTTCCTCCACCCTGGCAAAGCGAGGTAAACCCTTATGCTGTTCCTCCGCCGTCGTGGCCCGTTCCGACAACAGCCCTCCTTCCGACTGAGACAACTGTAGTGCCTGATGTGTGGGGACTCTGCCGGGGCTCCGAGGTCCCTCAGCCTGATCCACCCCAGCCTGATGAACAGAAGACCAAAGTGTCCAAGAAGGACAAAAAATCATCAGGGAAGAAGAGCTACAATGACAAGCCTCCTCCACCTGGAAGATCCAAGGGGGTCATCTCGTTTATTGGGCCAACTTATGGCTACATCGAAAGAGACGATCTCAAAAAATATTCCTTCACTTTTGATGCTTTTCTGGGAGTGCCCAAGAACATGATACCTGGAGTCAGGGTGCATTTTACAGCCTATAAGGAGAAGGCAGGGGAGTGTGCCACCGATGTATCTGTACCTCCTGGGGGGACTGAGGAGATTGACTCCACCATTATTGAAGGTTTTGTCTGCAATGCTATCCCGGAGCAGCAGCCTGGTGCAAAGCAGAAACCTGGCCAAATTGAGGCCAACATCGATGGCAAGACAAGAGCGCTGCTTTACTCAGAGAAGGACAGCACCATCACCCTGTTGCAAGGGGACCATGTGACGTTCAATTTGTTAACCGACATAGTTTCCCAAAACGTTAGAGCCACTAGTATTCGGCCAAAGACACCACAGACTTTTAAGATCactggagagaagagggaggtgGGTGTGATAATGAGCGTAAAGGGTGGCTCTGGCACCATAATGGCAGCGAACCAGAACAACCTGCCCTTTGAGACCACAGAGAACATGAGTCTAACTGAGTTCGCTGTTATGGATGAGGTGGACTTCACAGTCGTCACAATCAAAGGGAAGGAGAAGGCCATCAGAGTAAGGAAGCTGAAGTGCTTGGTGACACTGGAAGATACCATGGAGAAGAAGGTTGAAGACACTGCAGGAAAAGACAAGTGGAAGCCAGTGGCCCCAGTGGAGATGGTGTTGCCCCAGAGGACTGTGGTGTTTGAGGACGTTAGCACTGTGCAGCATGCAGGAACGGTCATTAAGGCTGTCCCCAAGGTGTCCGACAAGAAGCAGGAGCAGGGCCTTTTGGAGGTGTGGGTGGGTGGCACACAGAAACCGTTATCGTTTGAAGCCGCTGACGTTCTGACTGACGCCACCATGTTCGACGGAGACAAGGTTCACTTTAACATCTCCACCAACCGTGAGACCAAGGAGGAGCGTGCCGTCAACGTGGAGATTCTCTCCGAGACGTTTGAGGAGTCAACAGAGCAACGCAGAACTGGTGTGGTGGTGCAAGCTGGGGAGCTTTCTGGGACCATTAAGTGCCATCAGAGCCCCCAGCTGCTCTTCTTCCATCTGACTGAGGTCATGGAGGAGACGAAACTGGACATCTCAGAGAAGGTGGAGTTTAGTGTCATTCCGCTTGAAACAGCTGAAGGAGGTAACCAAGCGATCAGGATCAAACGCTTTATCGACAGTGTCTTCACCCGTGTGCCCAAGCTTGTGGGCGTGGCAACAAAAGAAAAGAAGAAGATGACCATCAAACTGATGAGAGACTCAAAACTGCTCATCAAGGGCGCAGGTGTCAAAGTAGAGCACAAAGATGATGATCTTACCAACGACAAACCTGCCTTGGAGTCGGACAAGATGAAAGCTGTCGTAAAAACTCTGCGGTCAAAAACTGCTGGCTCTGGATCTGGTGGCAAGGACTCGGACAGCAGCCGGCGGCGATACGGGCGCAGAAGCCGAAGCCGGAGCCCCAGCCTAGACCAGTTTGGCCGGGTGAAGAAAAGGCGGAGCACCAGCAGGGAGCGCAAAGAGCAGGATGGTAGCAACAGGTACAGGAGCAGTCGCAGCAGGAGTcggagcagggagaggagcagCCGTGGGAGCAGGAGGCGAAGCCACAGTCTGGAGAGAAAAGATTCCAAGCACAGAAGCAGCAGCAAGGAGAGGACATCCTCGAAAAGGAGCCACAGCAAGGAGCGAGATGGAAGCAGTCAGAGGAGCTCCAAGAACGGTTCAAGCTCGGGAAGTAAACCTCCAGATAGAATGAACGATGAGCTAGAAAGAAAGAAGAGGGAACTAGATGAGCTCAATGAGTTGATATACCGCAAGAGAGCCATGGTCGCCATGGAGCAACATGGTGGAGTTCCCAATTTCCTGCCAGAAGGGAAGCCTATGGAGAAGACCTGCTTTGACTACAATCATGGAATGCCAGAGCTTCCTCCACAACCTAAACCACCCACTGACATCAAACCCAAGTCCATTCTGAAGAAGCGCCCAGACCATGTCACAGGGCCACTTTTCCCAATTCAGACTGAACCCCCTAAAGCTCAACCTCTTGATCAAAGGCTTGTGGAACAGTACGGTTATGACGTTGAGACGCCCTATAAACCACACTCTGCCCAACCACCCTTCACCCAAACATCCAGTCAGAAGTCCTATTATGAAGGTTCACCTGCTGGACATCCTGCTCCTGACCTATCTGCAAAGTATGATCCATATGAGCAGACTTCTAGAGAGCACCCATCACAACCTTCTCCAGTTCGCCAAACACCTCTTGACCCTCATTCTTCAAAACGACCTCTTCCCAGCCGAGAGTCTCAGGAAAAGAACCCTAACTTGAACACCCAGCTCGCCCGTTTCCTCAACATCCTCAACAAAGGTGTGGATGCCGGTCTGCTGTCCACTGTGGTCAAGGAGTCTCGAGAGGAGATTGCTGGTATTCAGGAGGATAGTTCCCTCCCTCAAAAGTGTTATCGTGGGTCGCGTGAACGTGGGGATGAAGATCAGTACAAGGATGCCtacaggggaagagaggaggagccaGAGCGGCCGCACAGGGCCTTCGACATGGAGCGAGTGAAGACCTCTGAGGCTAAAGATGACCCCAGAGACGAAGACCGGCTGCTGCCTCACGAGAGAGCAATCCAGGACAGTGGTGGCTTTTCCGGGATTCTAGGAATGACATCCCACACCCAGTTCCTGAGAGAACCTGAACGTGTGGAAGAAGAGGATGACTTCCTCTATGGGGGTAAAGCCCCAGCAGCAGCGGCTGAGGAGGAGCGCTATGAGAAACCTGGGCGCACAGACAGATCCAGGGATGACGGGAGGTccagcccagccagagccccggTGGAGGAGACCAAGAAGCAGGAGAGTCAGGACAAGACACAGCACTTTGACAAGATCAAGAGCCTGCTCCAGGCCATCGGCCTGAACCTAAACACCTCCGAGGTCACCAAGCTGGCAGACAGGACCCAGGAGCGCCTCTACGGGACAAAGTCATCCAAACACTCATCAGattcctctgagagagagacaaagcactCATCTAGGCGGGGAGATCGGCATCGGCGACGCAACACCGACTCATCTGATTCCGAACGCCTCCGATCGGCCTCGCCCTCCAGGTCTTCCCAGCAGGAGGTGTACCTCAGCCCCCAAGACACCCCGGAATATGGAGGGTTCCTTGACCCGGAAGAGGAGGCTGCCTTGGAGAAGGCAAGGCAGATGCAGAGCCTCACCAAGAAAGTGAGCGTCTCGCCCCCCACCACCTCACCCACCTCCTCCTCACATCCTGGCACATCCTATTCCACCACAAAGTGGAACTTCCCTGACAAGAGACAGCCCATTGCTCCTAAGGGTTGGCCTAGCAAGGGGTGTAGTACCAACTATCTCTCATCACTGCTGCCCGGTCCGTTAAGCCCCCCCCAAAATATTTCCCCTGTCCCATCCTTGACAAACACACCTTATGTTCCTGCTGGTCAACAAACAGCTGGGGTGTATACTTATGCTTCGCCTGTGGGACAATCCCCTGGCCTACCCACGGCCTTGCCCACCGCTTATTATGGGCATCCTGGTGCCCCCATGATACCGTTTGCAAAGACTCAGCTCACACAACAAGTGAATATATTGAATCAGGTGACTGTATCGAATCCCACAATGGATGTCTTAAGTCAAATCCTCCAAGTCAACAGCCAGTCTAGATGCCTCAAGGTGATTGAAACAGTCAAAAGTGGGTCCGGTGCACAGCAGGATTCGCCAAGACATAATATCACCATACCTCTCCAGATCAACACACAAAGCCCCGATGCTGCAGCTGGTCAGCCCTCGCCTCCCCCTCTATCACCAGAGACTCCGGGTCCACCAGTGACGGAAGACGATATCAAGGCCAAACAGAAGAAAAGGCTGGAGCAGTTTAACCTGCGGATGAGACAGAAGAATCAGCAAAGAATGAACGATACTCGTGACAGTAGGAAGAAGAACGCAACAGGGAAAGTTCCCAAAGTTACCTTTGCAAACACAGAGCCTAGGAACGTGTGGATCTGTGGCCACTCCCTTATATATTGGGCAGAGATGAGGGCCAAGTCGCCCGAGATTGGCATGCAACTGGGCATGGACCCCAGCAGTGTGCGGGTGTGGTGGAAGGGCACACAGGGCATGACGTGGGCCCAGCTGCTGCCCCAGCTTGACCAGCTGAAGATCAAGTGGCCCAGCCCAGACGTGGTCATCCTGCACCTGGGTGGGAATGACCTGGGCACCCACAACCCTGAGGCCCTTCTGGCATCTGTGAAGAAGGACCTGACCTCCATGAGGAGCATTTTCCCACAATGCCTGTTGGTCTGGTCTGACATATTGCCCCGGATTTCCTGGAGGCACACAGAGGACAGCGACGCAGTGGACAATGTTAGGGCTGCCATCAACAGAAGAGTTCACACCATCATCGCTGAGCTAGGTGGCACTGCTCTGACCCATGACAACATCATGTGTGGCTCAGACGCAGGCCTGTACAGGCCAGATGGTGTTCATCTGTCCGGTAAAGGTATTGATACTTTCAACTTGAACTTGCAGGACTTTTTGGAGAAGTGGGAGACCGAGGCAAGCAATGGTCCTGAGATGAGTTAAGAAATGCCCAATGAATTTGTTTTTTTATTGAGGGTGGTTTTATTTTCATTTCTCTGTTGTCATAGTTACCTTACTGTGCTGGAGCGCTGGATACCAACCTACGGGTTGATTTTAGATGTAATGTTACTTCATTGCAAATAATACATTCTGTTATGGTAGTATCCACTTTGATTAAATTCTGTATgtaatcttttctttttttaagtTTTAGCATACTGATGATTAGCATGTTGTTTATCCATAAAATGCTAGACTTTTACTTATTGTATGAATTTTGTTGGACAGAAACAAATAAACTAGATAATTGGAAAATATCATGTGCTTGGCATTTCATTCAGCTCTGAAGCCTCTGAGATATAAAACTTGTGATAGAAGAGGCATTCAAACTAGGTTGTCTGTAAATTATGGCGGTAAAAGTGAAGGTCTGTTAAGTGGAAATTCTAACATTGTCTCTTTCTTGTCAAAACATATACTCACTCAATTTTTAAGTTAActgcagaagaagaagaaggaagatgACTTTATTGTCCAAAGTACACAAATATCCAACGGAAATTCTACAGGTATACAAGAGGTAACTTTTGTTTGTACACTGTTGCTAGAGCTTTTCTAGTGTAGTAGTTAGCTAGCAGATTGGCCACTCCAGGGTTCTCTTATGTATTACTTTACCTTTTATTTCTGTAACTTAATGTTCTCTTTTTTTTGTTCACTATCCAAGCTGTAAGGTTGCTTGTTGCTGACCAGCGTCAAGTTTTCTTTCCCTCCTACCTACCTAGGAGTCTCTTTACCTTTATCCATTTTCTAGGATGGTCTCAGGACTAGGTTTTGAACATCCAACATAGCAAAGGTAACACAAGTTCAGctgaattatattttaaaaagagAACATTTTTAATTTTTTGTCACTTTTTGGAAATGATACAGCATTCAATAACAAAGATCTGTGCAATCCAGTgttgatgtacagtgtagtaatTTTGGAAGTTCTGTCACCATACTTTTCTGTGATGTTTCTGTATTATTTCGATCGAAATATAAAATGACGTACATAGGTGACTGTGAGGTGTGCATGTTGTGACATCTGACGTTGTTGAGATAAACATGTAGTGCACAGAGCGTCAAGATCGATGAAAATGCACCCTAAAGATTATTTTcagaactaaaaaaaaaaaaatgcatctgGGTAAGTTTTTCGTTGTTGTGTGTTTAGTCGCTGAAAGAATGTTtcttaaaaataaatgtacacctGTCATAAGGCTTGTTACTAAACGTACTGCTATTTTCATCGTTTCAATCCTGAAAGATCATCTTTCTATGGTGTGACAATAAACACCAGACTATTATGAA

Function

NR:

description
uncharacterized protein LOC110502366

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580333.2 True 7147 mRNA 0.49 18 17815233 17828699

Neighbor

gene id symbol gene type direction distance location
LOC110502365 LOC106605918 coding downstream 8055 17792830 ~ 17807178 (-)
LOC110502361 LOC106605890 coding downstream 33718 17725263 ~ 17781515 (-)
LOC110502357 LOC106605561 coding downstream 167645 17508036 ~ 17647588 (-)
LOC118943816 NA coding downstream 343543 17454706 ~ 17471690 (-)
LOC110502354 ncoa4 coding downstream 361764 17444474 ~ 17453469 (-)
LOC110502367 LOC106605930 coding upstream 13937 17842636 ~ 17881838 (-)
LOC110502369 apmap coding upstream 119422 17948121 ~ 17956482 (-)
LOC110502372 LOC106605977 coding upstream 135058 17963757 ~ 17967763 (-)
LOC110502373 LOC106605981 coding upstream 168577 17997276 ~ 17999926 (-)
LOC110502375 LOC106605994 coding upstream 255242 18083941 ~ 18127862 (-)
G1838048 NA non-coding downstream 95197 17662654 ~ 17720036 (-)
G1837942 NA non-coding downstream 233984 17520967 ~ 17581249 (-)
G1837941 NA non-coding downstream 294889 17520039 ~ 17520344 (-)
G1837940 NA non-coding downstream 295614 17519333 ~ 17519619 (-)
G1838165 NA non-coding upstream 111864 17940563 ~ 17940840 (-)
G1838166 NA non-coding upstream 112401 17941100 ~ 17941321 (-)
G1838168 NA non-coding upstream 120754 17949453 ~ 17986981 (-)
G1838191 NA non-coding upstream 159908 17988607 ~ 17988939 (-)
G1838196 NA non-coding upstream 166435 17995134 ~ 17995487 (-)
G1837980 NA other downstream 96029 17709772 ~ 17719204 (-)
LOC110502353 LOC106605805 other downstream 389913 17420323 ~ 17425430 (-)
G1835092 NA other downstream 2067498 15745638 ~ 15747735 (-)
tmem254 cj057 other downstream 2144053 15666203 ~ 15671223 (-)
LOC110502394 LOC106606249 other upstream 1020998 18849389 ~ 18854222 (-)
si:dkey-51a16.9 LOC106576688 other upstream 1283343 19111958 ~ 19145332 (-)
LOC110502408 LOC106606370 other upstream 1456697 19261070 ~ 19385465 (-)
G1841694 NA other upstream 3114608 20943307 ~ 20943615 (-)
G1841959 NA other upstream 3516815 21345514 ~ 21371799 (-)

Expression


Co-expression Network