LOC110502369 (apmap)


Basic Information

Item Value
gene id LOC110502369
gene name apmap
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 17948121 ~ 17956482 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580337.2
GACAGCAGCTGTCGCTGACGTAGAAGAAAAAAATGCGTATTGCGAAAAAGGTGTCCACTCAGAAAGCTCGTCGTATACTGTAGATATCTCTACGATATCCTGTATTTGTCTGTCTTTACAACCAATCAAATGATCAACCTACTCATGTAGCGAGCTTCTTATTTTAAACATCATTCTTGGGTAATAGAGTCATAGTAGAAGAAGTCTCATTTCATTATGAATGAGCCAGAGGGACTGCGGTTCAGGAGACTGAACAGACCACAGATCATCACAGACGAATTACAGGAACCCCAATACAAGGGCACCAGTACCTATAGTGGAAAGGTATTCCGTGTGATCCTGGTGACCCTGGGAGGATGCCTGATCCTTCCAATGCTTGTAGTCTTTTTTCTGCTTGAGTCTCCTATTCACCCTGAGCTGCTTAGCCTCAATGAGCCGCCCCTTATGTCTGGCTGTTACGAGCCCAACTTTAAGCTGAGGGAGGCACAGCGGCTGTTTGAGGACCAGCTTGTTGGCCCAGAGTCTATCGCTAACTTTGGAGattTGATTTACACTGGTACGGCTGATGGAAAGATAGTGAAGATTGAGGGCAAGAGCATCACTGTTATAGCCAGACTTGGCAAGCCACCCTGTGATGGATCCCGTGAACAGGAGCCTAGCTGTGGACGACCCCTGGGTATCAGAGTGGGTCCTAACGGCACCCTGTTTGTAGCTGATGCCTACCTTGGGCTGTTCAAGGTCAACCCTGTCACAGGTGAGGTGACCAACCTGGTGTCGGCTGGGCAGATGGTTGGGGGCCGGAGGCTCTCCTTTGTCAATGACCTGGATGTAACGCAGGATGGGAGGAAAGTGTACTTCACCGACTCTAGCAGCAGGTGGCAGCGCAGAGACTACCTTCATCTCATCATGGAGGCCACAGCAGATGGACGCGTGTTGGAGTATGACACAGAGACCAAGGAGGTGACCGTGCTGATGGAGAACCTTCGTTTTGCCAACGGGATCCAGCTTTTCCCTGATGAGGAGTCTGTGCTGGTGGCTGAGACCACTATGGCTAGGATACGCAGGGTCCATGTGTCAGGTCTAAATAAGGGAGGAATGGACACGTTTGTTGACAACCTTCCTGGTTTCCCTGACAACATCCGTCGCAGCTCCTCTGGAGGGTACTGGGTGGCCATGTCAGCTGTGCGGCCCAACCCTGGATTCTCCATGCTGGACTTTCTGGCCCAGAAGCCCTGGATAAAGAAGCTAATATTTAAGcTCTTCAGTCAGGACGTGCTGATGAAGTTTGTGCCTCGCTACAGTCTGGTGATAGAGCTCCAGGAGAGCGGGGCATGCATGCGTAGCTTCCATGACCCCCACGGCATGGTGGCAGCCTACGTCAGCGAGGCACACGAGCACGACGGCCACCTCTACCTAGGCTCTTTCCGCTCCCCTTACCTCTGCAAGCTGGATCTCAGCAAGGTTTGAGCTGGGAGCTGAGCACAACCGCTGTCTCGAAAAAAAAAAAACCATATAGTGTTGCTTTCTAATGAAAACCACTCATCTCCAAAACAGGAACTTTTCAGGAAATGGGAAAAACTGCCATATTTTCCCATTAACAAACATACTATTATGAAACTTCAGAAGCTATTTTGAATACATGTTCTTGGTCCTGGAGTCATGAAATGTTCAGAGTACATTGAGGGGAGTTACCGCTTTCAATACGTGTTAAATAAAAATGGAGAATAGGTTTTCATCAGACAGCAATATGTTCCGCACTGTGAGACTGCTCTCTGCCTATCTAACACCTCCCTACCTAGTCTTTCCCAAAGGAGTGTTTTCCAATAACAGATACATTGGAATTGATCGGAATGGCTTAATGCTTGATGTGCTGCGTTTGCATTGCTTTTCGCCAGCTTCAGGAAAACATGGGCTAGTCTTCATTAAGTAGCTGCACTACTGAGGCACATTTGACTGGGATGCATATCCATCCTTTCTAGTCTTATCAGCCCACAATGAACTATTAACCCTTTAACTTCTGTTGACAAGTATGATGGTGTGTTTCCTTTGGAGCTCaagtgcttttttttttaccaagcaTTCCTTGGGCCAAATTGTTTGTGAAGAAATCCCCATGTAAGGTACATTGTATTTCAGGTCTGTTTTGTTGAAATGAGGTGCCAAATGTGTTACTTTTCTTGTGTGAACCATTCAGTACTGAGCTCTCATCTCACCCCTAAAAATAACTGACAATGTTATTCTTGTACTTCAGACTTAATTTTATCAGTAGAAATAGATGTAAAGAACACTGAGTCTGTATTTTAGGAGTGCCACTTTAAACTGATTTCTTGTGTATATTTAGATATCCTAGACCAAGTTGATCATACTGTGGTGAAAAAGGAAATAAGTATGAATCATTTCCCCTGACTTTGTATATTGCACAACTGCTTAACGGAATGTCAATTTTTTGCTCAATGTTGAATGCCTTCAGCTGAGCTTCCTTTGAAATAAAACAGTTTGCCTAATAATAAAAA

Function

symbol description
apmap Predicted to enable strictosidine synthase activity. Predicted to act upstream of or within biosynthetic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in pronephric duct. Orthologous to human APMAP (adipocyte plasma membrane associated protein).

NR:

description
adipocyte plasma membrane-associated protein isoform X1

GO:

id name namespace
GO:0009058 biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016844 strictosidine synthase activity molecular_function

KEGG:

id description
K21407 APMAP; adipocyte plasma membrane-associated protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580337.2 True 2513 mRNA 0.46 9 17948121 17956482

Neighbor

gene id symbol gene type direction distance location
LOC110502367 LOC106605930 coding downstream 66283 17842636 ~ 17881838 (-)
LOC110502366 LOC106605925 coding downstream 119422 17815233 ~ 17828699 (-)
LOC110502365 LOC106605918 coding downstream 140943 17792830 ~ 17807178 (-)
LOC110502361 LOC106605890 coding downstream 166606 17725263 ~ 17781515 (-)
LOC110502357 LOC106605561 coding downstream 300533 17508036 ~ 17647588 (-)
LOC110502372 LOC106605977 coding upstream 7275 17963757 ~ 17967763 (-)
LOC110502373 LOC106605981 coding upstream 40794 17997276 ~ 17999926 (-)
LOC110502375 LOC106605994 coding upstream 127459 18083941 ~ 18127862 (-)
LOC110502376 LOC106606039 coding upstream 191057 18147539 ~ 18151845 (-)
LOC110502378 NA coding upstream 286216 18242698 ~ 18255850 (-)
G1838166 NA non-coding downstream 6800 17941100 ~ 17941321 (-)
G1838165 NA non-coding downstream 7281 17940563 ~ 17940840 (-)
G1838048 NA non-coding downstream 228085 17662654 ~ 17720036 (-)
G1837942 NA non-coding downstream 366872 17520967 ~ 17581249 (-)
G1838191 NA non-coding upstream 32125 17988607 ~ 17988939 (-)
G1838196 NA non-coding upstream 38652 17995134 ~ 17995487 (-)
G1838199 NA non-coding upstream 45241 18001723 ~ 18002084 (-)
G1838202 NA non-coding upstream 49574 18006056 ~ 18006277 (-)
G1838254 NA non-coding upstream 182239 18138721 ~ 18170916 (-)
G1837980 NA other downstream 228917 17709772 ~ 17719204 (-)
LOC110502353 LOC106605805 other downstream 522801 17420323 ~ 17425430 (-)
G1835092 NA other downstream 2200386 15745638 ~ 15747735 (-)
tmem254 cj057 other downstream 2276941 15666203 ~ 15671223 (-)
LOC110502394 LOC106606249 other upstream 893215 18849389 ~ 18854222 (-)
si:dkey-51a16.9 LOC106576688 other upstream 1155560 19111958 ~ 19145332 (-)
LOC110502408 LOC106606370 other upstream 1328914 19261070 ~ 19385465 (-)
G1841694 NA other upstream 2986825 20943307 ~ 20943615 (-)
G1841959 NA other upstream 3389032 21345514 ~ 21371799 (-)

Expression


Co-expression Network