Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110502380 |
| gene name | syu |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048587.1 |
| NCBI id | CM023241.2 |
| chromosome length | 62880378 |
| location | 18310906 ~ 18327329 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Synuclein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021580361.2 | False | 2363 | mRNA | 0.48 | 5 | 18310906 | 18327319 |
| XM_036959996.1 | False | 1356 | mRNA | 0.50 | 4 | 18316871 | 18327329 |
| TU2105092 | True | 2229 | lncRNA | 0.49 | 5 | 18311011 | 18327290 |
18,294,000
18,296,000
18,298,000
18,300,000
18,302,000
18,304,000
18,306,000
18,308,000
18,310,000
18,312,000
18,314,000
18,316,000
18,318,000
18,320,000
18,322,000
18,324,000
18,326,000
18,328,000
18,330,000
NC_048587.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502378 | NA | coding | downstream | 55056 | 18242698 ~ 18255850 (-) |
| LOC110502376 | LOC106606039 | coding | downstream | 159061 | 18147539 ~ 18151845 (-) |
| LOC110502375 | LOC106605994 | coding | downstream | 183044 | 18083941 ~ 18127862 (-) |
| LOC110502373 | LOC106605981 | coding | downstream | 310980 | 17997276 ~ 17999926 (-) |
| LOC110502372 | LOC106605977 | coding | downstream | 343143 | 17963757 ~ 17967763 (-) |
| LOC110502384 | LOC106606127 | coding | upstream | 46599 | 18373928 ~ 18434140 (-) |
| LOC110503086 | LOC106606152 | coding | upstream | 107223 | 18434552 ~ 18502963 (-) |
| LOC110502386 | opn4m1a1 | coding | upstream | 200037 | 18527366 ~ 18601530 (-) |
| LOC110502387 | LOC106606172 | coding | upstream | 296980 | 18624309 ~ 18738296 (-) |
| myoz1a | LOC106606220 | coding | upstream | 412967 | 18740296 ~ 18760542 (-) |
| G1838322 | NA | non-coding | downstream | 93495 | 18213772 ~ 18217411 (-) |
| G1838299 | LOC106606050 | non-coding | downstream | 120983 | 18189566 ~ 18189923 (-) |
| G1838254 | NA | non-coding | downstream | 139990 | 18138721 ~ 18170916 (-) |
| G1838202 | NA | non-coding | downstream | 304629 | 18006056 ~ 18006277 (-) |
| G1838199 | NA | non-coding | downstream | 308822 | 18001723 ~ 18002084 (-) |
| G1838416 | NA | non-coding | upstream | 139167 | 18466496 ~ 18483789 (-) |
| G1838521 | NA | non-coding | upstream | 290970 | 18618299 ~ 18619145 (-) |
| G1838628 | NA | non-coding | upstream | 476748 | 18804077 ~ 18805565 (-) |
| G1838709 | NA | non-coding | upstream | 613958 | 18941287 ~ 18941544 (-) |
| LOC110502361 | LOC106605890 | other | downstream | 580394 | 17725263 ~ 17781515 (-) |
| G1837980 | NA | other | downstream | 591702 | 17709772 ~ 17719204 (-) |
| LOC110502353 | LOC106605805 | other | downstream | 885586 | 17420323 ~ 17425430 (-) |
| G1835092 | NA | other | downstream | 2563171 | 15745638 ~ 15747735 (-) |
| tmem254 | cj057 | other | downstream | 2639726 | 15666203 ~ 15671223 (-) |
| LOC110502394 | LOC106606249 | other | upstream | 522368 | 18849389 ~ 18854222 (-) |
| si:dkey-51a16.9 | LOC106576688 | other | upstream | 784713 | 19111958 ~ 19145332 (-) |
| LOC110502408 | LOC106606370 | other | upstream | 958067 | 19261070 ~ 19385465 (-) |
| G1841694 | NA | other | upstream | 2615978 | 20943307 ~ 20943615 (-) |
| G1841959 | NA | other | upstream | 3018185 | 21345514 ~ 21371799 (-) |
