LOC110503087


Basic Information

Item Value
gene id LOC110503087
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 18920198 ~ 18966527 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110503087
ATGTATGACACAGATACGGATCAGAAGGCCTTCAAGAACCACCTCCAGGCACGGACTGAGGCTGTGGAGGTTTTTGACCAGGTGAGACTGAACATGGCCCATCGCCTGTCCGAGCTCCCCAGGAGGTATCCCATCCACCAGAGCCAGTTGAGTTCGGATCAGTCTGATTCTCTGTGCTCTGAGTCAGAGGGGGACCAGCTTGAGgacctaggggttctgcccaacacccagacgTGGATCCACCTGATcaCATTAGACTTCTACAATAGGATGTCAGTGAGTCGTCATGGCACAAAGGCTGGATGGGGAGGCTCTGACCCGCATGTTCTCTCTCACCGTGTCTATCTTTGCCATTGGGGGTCTACTGGGATCCCTCATGGTGGGCATGCTGGTCACCAGGTGAGgtaggAAAGGCACGCTGGTGAACTCGACGGTGTTGGTGTTCATCACTGGATCACTCATGGACTTCAGAAGGATCTGTAGCTCTCCAGAGATGGTCGACTTTGGCCGCTTTGTCACGGGGATCCACTccgttacaaacaaaccagtgtGTCCACTCACTGGGGGGGAGATAGCTGCTAAGAACTTGCGTGGTGGGGTCTTCTCGGCCCAGATCCTGGGTCTACACAAACTTCTGGGAAGGGAGGAGCCCCGGACCCTGTTCCTCTcgctggtggtggtaacagctgaTGCTGTTGCCATGGTTTCCGGAGAACCCCAATACATGCTGTTTGAGAAGCACAATGTCTACGCCACCATTGCAGCATTGAAATGGTACTGGCCCAAGTGAAACATCCAGTtggagattgAGGAGATGCAGGAGGAGGAGCGCTCTCTGTTGTCGGTGGAGACTGTGTCGGTATGGTGCCCGATACTGGATCCGTCTATGCGATCGCATTTGCTCATTGATGTGTTCCTCAACATTGGCATGCAGCTCTCCGGCAGCGACGTTCTCTGGTTCTATACCAACAACATCTTTGAGAACGCGGGCATCCCAGCCCCAGTGATCCAGTACACTACAGTGGGTACAGTAGCCGTCGAGATCATCGCTGACCTCACTGGCtGTTTTACAATAGAGAATCTGGGCAGAAGGCCTTTCCTCATCTGGGAGTTTCTAGTCATGGGATTCTGCTGTGCTTggatcactctctccctcatCTTACAGGTTCACTTACCATTCATGCCTTATGTCAGTGTTGGATGTGTGATCCTGTGTCATTACTTGTTTCTGCATTAG

Function

NR:

description
PREDICTED: solute carrier family 2, facilitated glucose transporter member 9-like isoform X2

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016020 membrane cellular_component
GO:0022857 transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110503087 True 1237 mRNA 0.53 13 18920198 18966527

Neighbor

gene id symbol gene type direction distance location
LOC110502392 LOC105005759 coding upstream 100579 18805888 ~ 18819619 (+)
zgc:153169 LOC105005758 coding upstream 114632 18786735 ~ 18805566 (+)
LOC118943821 NA coding upstream 182716 18733761 ~ 18737482 (+)
LOC110502381 LOC106606107 coding upstream 548192 18346584 ~ 18372006 (+)
LOC100136626 LOC106606089 coding upstream 619920 18269654 ~ 18300278 (+)
LOC110502398 LOC106576696 coding downstream 29066 18995593 ~ 19002210 (+)
LOC110502399 LOC106606289 coding downstream 41709 19008236 ~ 19040034 (+)
LOC110502400 NA coding downstream 109950 19076477 ~ 19078412 (+)
LOC110502403 LOC106606339 coding downstream 184658 19151185 ~ 19168638 (+)
calhm3 calhm3 coding downstream 202273 19168800 ~ 19171227 (+)
G1837813 NA non-coding upstream 4508 18915468 ~ 18915690 (+)
G1837798 NA non-coding upstream 27819 18891833 ~ 18892379 (+)
G1837746 NA non-coding upstream 139491 18774519 ~ 18780707 (+)
G1837643 LOC106606172 non-coding upstream 292696 18624374 ~ 18627502 (+)
G1837637 NA non-coding upstream 300919 18618709 ~ 18619279 (+)
G1838767 NA non-coding downstream 60178 19026705 ~ 19026919 (+)
G1838770 NA non-coding downstream 61858 19028385 ~ 19028646 (+)
G1838771 NA non-coding downstream 62589 19029116 ~ 19029339 (+)
G1838747 NA non-coding downstream 73626 19040153 ~ 19040300 (+)
G1838832 NA non-coding downstream 75822 19042349 ~ 19042582 (+)
LOC110502370 NA other upstream 972823 17943337 ~ 17947408 (+)
G1836916 NA other upstream 1594838 17322174 ~ 17325360 (+)
G1836646 NA other upstream 1807371 17112370 ~ 17112827 (+)
G1836321 NA other upstream 2026859 16892235 ~ 16893339 (+)
G1839383 NA other downstream 555737 19522264 ~ 19523012 (+)
LOC110502420 slc18a2 other downstream 1070596 20037044 ~ 20058237 (+)
G1839872 NA other downstream 1097317 20062064 ~ 20064987 (+)
LOC110502429 ttc27 other downstream 1392270 20358591 ~ 20516930 (+)
G1840558 fbxo28 other downstream 1815338 20781865 ~ 20785203 (+)

Expression


Co-expression Network