si:dkey-191g9.7 (LOC106606765)


Basic Information

Item Value
gene id si:dkey-191g9.7
gene name LOC106606765
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 20810137 ~ 20815145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021580462.2
gtcaccTGTGGATGTGAGGGAAGGAGAAGCGCTTTCCTTTTCCTTTCCAACATCCTGGACTAACAGGGGTTCTCCGGGGATCCTGGGGGATAACTGGACTCTGACACTGAGtgattgagaaagagagggagaggaggaggagagaaaaggaacATAAGGCACGGATCTCATATTCTTCCTGAAAGGGCTTTCCCATGGCAGAGAGTGGGCATCCTGTGTCTGAGTTATACCCACCAGAGGGCAGTGTTTCCCTTGACTCTGCTCTCTTTACCGACCCCTTTTTACCCCTCTCCCAGAGCTCCACAGATGGGCTGACAGGTCCCCTGAGGCAGGAGGAACTCAGGAGGAGCTCCAGTGAGCATACAGCTCCATGCTctaacagagacagaaagaatgaCAGCCAGGGGCCTACTCAGGCTGTCCAGCACACCATCCAACAACATGTGGACCCCAGGACTACTGTTCGCCCTCACAGTATGGCTGAGTCATCATACACAGCCCATCACCATGAAGAGGGCATCACCAGCCATGGTCACCAAGCCAGCGGGGACATGTTATCAGCCTTCGGAGAGAGCCAGGAGCCTTACCCCTCGTCATCATCCCAGAAAGACCTGAGAGGACTGGATCTGTCCAGGTTGCCTGTCCAGAGGAGTCACTCACATACCCTCCACATGCTCAGGGAGGTCTCTGCCCCCCCACCCCGCAGTGAGACCAGCTGCCCCTTGTATCCAGGGAGAGACTACCTTTTCCAGGATGCCTCTCCTCAGGCCTTCTCCAGGTTTGCCTGCAAGCAGCCCATGCAGGTCCAGAACTGCAACACTGTCAACACCACCGGCAGAGGGGGAAATGGTAGAGGAGGCAGCCCCACACAGCAGCCTCAGGCCGGGAGTGTCAGGGTCGGTGCCCCTGGCCCCTCTAACACAGCCGCTGAGGTCGGCGATGAGACCCAACAACAACATTCATGTGAGGAGGCCATCTGCTACTGCACTTTTGTCCATCACCACGGGGCGTTGGAGGACACGTTTGCGGCGTACTGCCACCCCCAGCCCATCCTCGCCACTGCCCAGTTGATGCCACGCTTTCCAGGCACCGAAGCTAAGTTCAGGGACCAGAGGGTGCTGCCACCTCACCTGGCGCCtaccctcatctccctcccttgTCTCATGTCCTCTGGCAGTGAGACAGGACTGGATGCCAAGCGCCTGCTGCAATGCTGCAACCTCAATTGCAACCTCAACTGCTCCTGGGCCAACACTCTGCCTCCTAGTGGAGCCCTGCAGCAGCAGGAGAATAGTTGTCCTAGCAGCAACAATAGAGCCACcagggacacagggactatgACATCCCACAGGGAGCTCAGGGACGTGGGGGTGCAGACTGGGAAGATCCACGAGGCATGCCTGGCCCATGTGTTCCCCCAGGTCTGCCTGGTGGAGAAGAACAGGAACGAGAATGAGAACGAGAGCGGGAATGAGACGGATACATCCCAGAAGTCCCCAGTGAAGGAGGTGAAGTGGGACGCGGAAGGGATGACGTGGGAGGTGTACGGGGCGTCTGTGGACCCTGAGGAGCTTGGTCTGGCCATCCAAAAGCACCTGGAGCTGCAGATCAAGGAGACGGCTGGCCGCGCTGCTAACCTGTCCTGCCAGGATACGGCCACGTCCAGGAAGAGCAGTATTGGCGCTGGCGACaggaagaagaggggcggggtgATGGGCTCAATCAGGACCCCAGCCTGCTGCGCAAGCTCCAGCACGGCTGTGGACTGACGGGGGGAGACCTGAACACTGTGCTTAGTGGTCAAGTTGGCAGCAGCTTTATTATGCATCAAATGTGACCCCAAAACACCAGAGACAGTGTGACCAGCCTCACATAGTGAATAAGATCATCTGTGTGTCAGTCAGAATATTGGCATGTGTACAAGAACCTACCATCATATTGATAAAAGAGGTGAATGGACAGAGAGTGAAAGGTTGTATTTGGATGGAATTCATTCGTAATTGTACCTTCATCATCAGCATAGATGCCCAGTGATAGAACGGAGTGCTGCCACAACAGTCAAACAAAGGGATACAATTATTTCTTTATCATTTAGAGTTGATTTATTTACTAGGGGGGAATAACTAGGGGTTTCTGTAAACAGACAAGCTAAAAGTTATTAACAACACAGAGTGGGAAAAGAAAGCATCAATACACCCTAGACTTCTAATCACTATGGCTGGAAATATATGTCTATCTTTCTCATTTCTAATGCTAGGATTTAATCAAATTCTGTGTGAATGTTTGAAGCATGCAATAGTTTTCGTTTTTTTGCATTTCTTTTCACATTATTTCTACTGCCCCATATTCACATTGAAAATATAGAGAAGTTATCGCACACCTGATTTAGCAGTACTTCATTCTACTGGCATATAAAATAAGTCTTTAACTAACCTCAAATTCTGTGATCTCAGATGATTCATCCAACACTGTGATGCAGCGGAGAATACCGTGACATAGAGAAAGGGTTAACAGACTGGAAAGCGTTGATCAAGAAAGCTGAAAAATCTCATCAGATATCATTCAATATATTAATGCACATAACAAAAGGCCAAATAGCCTATTTGTGAATAATACTTTCTTTCAATTTTTCAACATTGTCATATGAACATTTATTGCATTTGACCCAGTACTTTAATATGTCTCAAAAACATTATGGGTAACGGATCTAATGTGTTACATGTTCTGCATGATGATTGTCTCAAAACCACAGCCAATGTTTTAGTCATGTACTGTATCTAACCAGAGGGTTAAAGGTTAActatcaccactgtaacagaatCTTAGCAATTTACTGTGCCATAAAAATGTGCTGCATTGGTAGGCCTTTTGTAAAATGGATGAGTTACAACTAGCCGGTCAGTTTCATAAACCTTTCAAGTATGTCACTTCCATATTGCGTTTGAAAGAGATTTTGCTCAATCAATTATAACCAGATTTAAAGTAGCTTTTACTGTTGCTACAATGCAGGAATAACTGTTTTATCATTAAATCAGTAATATAATGTTTAAGAAAGTTATTCTTGTGTATTAAATAATTACCAAGCTTGG
>XM_021580463.2
gtcaccTGTGGATGTGAGGGAAGGAGAAGCGCTTTCCTTTTCCTTTCCAACATCCTGGACTAACAGGGGTTCTCCGGGGATCCTGGGGGATAACTGGACTCTGACACTGAGtgattgagaaagagagggagaggaggaggagagaaaaggaacATAAGGCACGGATCTCATATTCTTCCTGAAAGAGCTCCACAGATGGGCTGACAGGTCCCCTGAGGCAGGAGGAACTCAGGAGGAGCTCCAGTGAGCATACAGCTCCATGCTctaacagagacagaaagaatgaCAGCCAGGGGCCTACTCAGGCTGTCCAGCACACCATCCAACAACATGTGGACCCCAGGACTACTGTTCGCCCTCACAGTATGGCTGAGTCATCATACACAGCCCATCACCATGAAGAGGGCATCACCAGCCATGGTCACCAAGCCAGCGGGGACATGTTATCAGCCTTCGGAGAGAGCCAGGAGCCTTACCCCTCGTCATCATCCCAGAAAGACCTGAGAGGACTGGATCTGTCCAGGTTGCCTGTCCAGAGGAGTCACTCACATACCCTCCACATGCTCAGGGAGGTCTCTGCCCCCCCACCCCGCAGTGAGACCAGCTGCCCCTTGTATCCAGGGAGAGACTACCTTTTCCAGGATGCCTCTCCTCAGGCCTTCTCCAGGTTTGCCTGCAAGCAGCCCATGCAGGTCCAGAACTGCAACACTGTCAACACCACCGGCAGAGGGGGAAATGGTAGAGGAGGCAGCCCCACACAGCAGCCTCAGGCCGGGAGTGTCAGGGTCGGTGCCCCTGGCCCCTCTAACACAGCCGCTGAGGTCGGCGATGAGACCCAACAACAACATTCATGTGAGGAGGCCATCTGCTACTGCACTTTTGTCCATCACCACGGGGCGTTGGAGGACACGTTTGCGGCGTACTGCCACCCCCAGCCCATCCTCGCCACTGCCCAGTTGATGCCACGCTTTCCAGGCACCGAAGCTAAGTTCAGGGACCAGAGGGTGCTGCCACCTCACCTGGCGCCtaccctcatctccctcccttgTCTCATGTCCTCTGGCAGTGAGACAGGACTGGATGCCAAGCGCCTGCTGCAATGCTGCAACCTCAATTGCAACCTCAACTGCTCCTGGGCCAACACTCTGCCTCCTAGTGGAGCCCTGCAGCAGCAGGAGAATAGTTGTCCTAGCAGCAACAATAGAGCCACcagggacacagggactatgACATCCCACAGGGAGCTCAGGGACGTGGGGGTGCAGACTGGGAAGATCCACGAGGCATGCCTGGCCCATGTGTTCCCCCAGGTCTGCCTGGTGGAGAAGAACAGGAACGAGAATGAGAACGAGAGCGGGAATGAGACGGATACATCCCAGAAGTCCCCAGTGAAGGAGGTGAAGTGGGACGCGGAAGGGATGACGTGGGAGGTGTACGGGGCGTCTGTGGACCCTGAGGAGCTTGGTCTGGCCATCCAAAAGCACCTGGAGCTGCAGATCAAGGAGACGGCTGGCCGCGCTGCTAACCTGTCCTGCCAGGATACGGCCACGTCCAGGAAGAGCAGTATTGGCGCTGGCGACaggaagaagaggggcggggtgATGGGCTCAATCAGGACCCCAGCCTGCTGCGCAAGCTCCAGCACGGCTGTGGACTGACGGGGGGAGACCTGAACACTGTGCTTAGTGGTCAAGTTGGCAGCAGCTTTATTATGCATCAAATGTGACCCCAAAACACCAGAGACAGTGTGACCAGCCTCACATAGTGAATAAGATCATCTGTGTGTCAGTCAGAATATTGGCATGTGTACAAGAACCTACCATCATATTGATAAAAGAGGTGAATGGACAGAGAGTGAAAGGTTGTATTTGGATGGAATTCATTCGTAATTGTACCTTCATCATCAGCATAGATGCCCAGTGATAGAACGGAGTGCTGCCACAACAGTCAAACAAAGGGATACAATTATTTCTTTATCATTTAGAGTTGATTTATTTACTAGGGGGGAATAACTAGGGGTTTCTGTAAACAGACAAGCTAAAAGTTATTAACAACACAGAGTGGGAAAAGAAAGCATCAATACACCCTAGACTTCTAATCACTATGGCTGGAAATATATGTCTATCTTTCTCATTTCTAATGCTAGGATTTAATCAAATTCTGTGTGAATGTTTGAAGCATGCAATAGTTTTCGTTTTTTTGCATTTCTTTTCACATTATTTCTACTGCCCCATATTCACATTGAAAATATAGAGAAGTTATCGCACACCTGATTTAGCAGTACTTCATTCTACTGGCATATAAAATAAGTCTTTAACTAACCTCAAATTCTGTGATCTCAGATGATTCATCCAACACTGTGATGCAGCGGAGAATACCGTGACATAGAGAAAGGGTTAACAGACTGGAAAGCGTTGATCAAGAAAGCTGAAAAATCTCATCAGATATCATTCAATATATTAATGCACATAACAAAAGGCCAAATAGCCTATTTGTGAATAATACTTTCTTTCAATTTTTCAACATTGTCATATGAACATTTATTGCATTTGACCCAGTACTTTAATATGTCTCAAAAACATTATGGGTAACGGATCTAATGTGTTACATGTTCTGCATGATGATTGTCTCAAAACCACAGCCAATGTTTTAGTCATGTACTGTATCTAACCAGAGGGTTAAAGGTTAActatcaccactgtaacagaatCTTAGCAATTTACTGTGCCATAAAAATGTGCTGCATTGGTAGGCCTTTTGTAAAATGGATGAGTTACAACTAGCCGGTCAGTTTCATAAACCTTTCAAGTATGTCACTTCCATATTGCGTTTGAAAGAGATTTTGCTCAATCAATTATAACCAGATTTAAAGTAGCTTTTACTGTTGCTACAATGCAGGAATAACTGTTTTATCATTAAATCAGTAATATAATGTTTAAGAAAGTTATTCTTGTGTATTAAATAATTACCAAGCTTGG

Function

NR:

description
G protein-regulated inducer of neurite outgrowth 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021580462.2 False 3089 mRNA 0.48 2 20810137 20815145
XM_021580463.2 True 2978 mRNA 0.48 2 20810137 20815145

Neighbor

gene id symbol gene type direction distance location
polr1c rpac1 coding downstream 8666 20796170 ~ 20801471 (-)
LOC110502435 LOC106606749 coding downstream 14497 20780780 ~ 20795640 (-)
LOC110502434 LOC106606739 coding downstream 35686 20765181 ~ 20774451 (-)
LOC110502426 NA coding downstream 503747 20302293 ~ 20306390 (-)
LOC110502422 LOC106606541 coding downstream 640925 20156403 ~ 20169212 (-)
LOC110502440 LOC106606775 coding upstream 17356 20832501 ~ 20849619 (-)
LOC110502444 LOC106606853 coding upstream 329495 21144640 ~ 21285931 (-)
LOC110502445 NA coding upstream 483449 21298594 ~ 21304431 (-)
LOC110502447 LOC106606998 coding upstream 697826 21512971 ~ 21516875 (-)
LOC110502449 LOC106607006 coding upstream 708589 21523734 ~ 21528655 (-)
G1841614 NA non-coding downstream 1684 20808243 ~ 20808453 (-)
G1841612 NA non-coding downstream 3176 20806616 ~ 20806961 (-)
G1841610 NA non-coding downstream 5458 20804387 ~ 20804679 (-)
G1841547 NA non-coding downstream 102255 20676815 ~ 20707882 (-)
G1841470 ltbp1 non-coding downstream 151802 20652789 ~ 20658335 (-)
G1841646 NA non-coding upstream 47267 20862412 ~ 20862668 (-)
G1841648 NA non-coding upstream 53008 20868153 ~ 20868472 (-)
G1841688 LOC106606791 non-coding upstream 112030 20927175 ~ 20928627 (-)
G1841696 NA non-coding upstream 129462 20944607 ~ 20944893 (-)
G1841704 NA non-coding upstream 140786 20955931 ~ 20956148 (-)
LOC110502408 LOC106606370 other downstream 1425095 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 1688794 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 1955965 18849389 ~ 18854222 (-)
LOC110502361 LOC106605890 other downstream 3079625 17725263 ~ 17781515 (-)
G1837980 NA other downstream 3090933 17709772 ~ 17719204 (-)
G1841694 NA other upstream 128162 20943307 ~ 20943615 (-)
G1841959 NA other upstream 530369 21345514 ~ 21371799 (-)
G1843946 NA other upstream 2367842 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other upstream 2400340 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 other upstream 2529946 23344353 ~ 23358461 (-)

Expression


Co-expression Network