LOC110502445


Basic Information

Item Value
gene id LOC110502445
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048587.1
NCBI id CM023241.2
chromosome length 62880378
location 21298594 ~ 21304431 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502445
ATGGCTCAAGACTATGCCCAAGGGAGAAGCTCCCTGACTGGCAGTGGTGATCACTTCTCCTATGAGAGCTGTGACCAGGCTGAGGCCTGCGGCTTTGACCTGCACGACGGGGAGAGACGACCTGGAGCTGAGCAGTAACTACTCAGCAACACTCTACATAAAGAGGGTTCAGAAGATCCTGAGGGCCCATGACCCCTGGAAGCCCCTCTTCCTGTTCCTGGCACTCCAGGCCATCCACACACCCCTGCAGGCACCAAACCACTTTCTGCGACGCTGCAGTAGCCCGGACAACTGCCTGCGACAACACTATGCAGCTATTCTGAGCTGTGTGGACGAGAGTGTGGGGGAGCTGGTGCAGTAGCTGAGAACCAGTGGCCTCTATCAGAACTCTGTTCTGGTCTACTCCTCAGACAACGGGGGCCAGCCTTTCTCTGGGGGCTGCAACTGGCCCATGCGTGGAGAGAAGGGTACCTACTGGGAAGGGGGAGTGCGAGCAGTGGGTTTCGTCCACAGCCCATTCCTGAAGCGGAAAGGGAAGGTGAGAAAGGCGCTGATCCATGTTTCTGACTGGTACCCCCTCCCCCCGTTGTCTCTGGTGTGGGGGGCCATCAGCCAGGGGCTGCCCTACCCCCGCACTGAGATCTTGTTCAATATCGACCCGGTATCGATGGCCCAGTGAGGCAGACTCCAGGCCCTCAACAGCTTCGGCATCTGGGACACAGCAGTGCGGGCAGCCATACGGGCTACGGACTGGAAGCTGCTGACTGAAAATGTAGGGGACTGTGTGCCGCCTCAGACCCTGCCCGGGGGGGTCCAGCAGTAGCAGGACATGGGGCAACACCGGGACCCTTATGAGATGTCAAACCTGGCTTATGCACGGCCGGAGGTGGTCAAGATACTGCTGACCAGACTGGCCGAGTACAACCAGGTGCCCCCCCCCCTGATGACCCACCTGATGACCACATGGTGGACCCCTCAGCTCCATGGGGGGATGTGGACACCTTGGCTGGATAAGGCAAGGCGCCAGGGGGCAGCAGGGAGGGGGAATAGTAGTAAGATGAAGCACTGTAAGGTGTGCAAACTGCAAGCCCTCTTTAAGAATGTGGGCTCCCAGATGCAGAGGTCCTCTCTGTTCTTTTAGTCCTCAGAGGGATGGAAGGAGCACGTGGACAGACAGGCAGGACTGACAGACTTACATGAGACTGGATCTTAGTCACTGGCTGTCCCCCGGCCACCAAGGAGGGTGCAACTGTAAGATTGATGTTGAGGGTGAGTTTTTGACGTATCATCTGCCCATCAACAGGACAAAATCAGAATGACACTCAGACACCCAGAGGGATATTTCTTGAACTTTTTTAAAAGTTGTACTTGGTGATATAATGGACCGTCCAGGCTAGACGCTGCTAATGGCATACTCCTCTGTTGCCTAACCAACTCTAAACAACACCTCACTGCATCAAAATCATAAATTGGGGATTGGCCAGCATAAACTTAGCCAGAAATTCTGTGGCTGTTGTGCTCTCCAGTGCggtcacagtacagtacacccaAAACCCAAGCCACGTTCCAGACATACACTTTTAGACAAAAagattccaaaagggttcttcagctgtccccataggagaacgctttctggttccacatagaacccctTTGGGTTCAATGTATTACCCTCTGTGgtaaaggttctacctggaaccaaaggggttcttcaaaggctcctcatatggggacagctgacaaccccttttaggttctagatagctcctttttttctaagagtgtatgtggCTCACACTGTAAGTGTGATATACCGGCTAGCAAATCGCGGAATATGAAAGAATGCAGACGTAACTGGAGCAGACTGGATCAGGGTGGCACTTAGGGTTTGGATGTGTCACATTATAGAAGCCAGATCACATCAGATCAGATCAAATCTGAGGCTTGCAACTCTTGCCTATAAGCCATTTGTGTAGGAACTAATGTGTGATTAtgcctgtactgtatataatgtaggTAACATTCAGCAATTCTGCAGCAATCCCACACACAGAAGGGAGAAACACTGTACATGTCTTATTTCCAGCAACAAGCTGCCTACTACTTCCCtgcctcctcctttctccctccagcCAAGTCTCACCCTTCCCTCTTGTCtgatctctcactctttctcccactctctctcatttCATCTGATTTTCTCTTGCTCTTTGCCTCTTTCCTACAGCGGTAGGAACAtgttcttcatcctcctcctccgcccTCTTCATCGCCTTCTTCTCATATTATTCTTCCTCCTCACTCTTTCTCCTTTCATTCGGGGACCAGGTCAGTTTGTAAGTAATAGGCAGGATGCATGTGAGTCAGAATTGAGATCTGATGTACAGAGTTACATAAACAGAAAGGGGGAGGAAGGCTTCCGAGGGGGGCAGCAAGGCCATGCTGTTTGAAGCACTCCCTGCCTTATCTGTTCTCTCGCCATTTGAAAAGAGGTACATATCCTGACATGCCGGTAAGTGTCTATGTATAGCTTGATGCTAATGGTATACTGAAATGCGTTTTGCCGTTTGCGGCTTTCCATTCATAAAGAGAC

Function

NR:

description
PREDICTED: arylsulfatase I isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502445 True 2599 mRNA 0.52 3 21298594 21304431

Neighbor

gene id symbol gene type direction distance location
LOC110502444 LOC106606853 coding downstream 12663 21144640 ~ 21285931 (-)
LOC110502440 LOC106606775 coding downstream 448975 20832501 ~ 20849619 (-)
si:dkey-191g9.7 LOC106606765 coding downstream 483449 20810137 ~ 20815145 (-)
polr1c rpac1 coding downstream 497123 20796170 ~ 20801471 (-)
LOC110502435 LOC106606749 coding downstream 502954 20780780 ~ 20795640 (-)
LOC110502447 LOC106606998 coding upstream 208540 21512971 ~ 21516875 (-)
LOC110502449 LOC106607006 coding upstream 219303 21523734 ~ 21528655 (-)
LOC110502450 LOC106607022 coding upstream 255569 21560000 ~ 21604318 (-)
LOC118943877 LOC106607043 coding upstream 356027 21660458 ~ 21663289 (-)
LOC110502452 LOC106607058 coding upstream 373769 21678200 ~ 21822311 (-)
G1841823 NA non-coding downstream 186176 21112208 ~ 21112418 (-)
G1841819 NA non-coding downstream 190491 21107896 ~ 21108103 (-)
G1841811 NA non-coding downstream 202310 21095858 ~ 21096284 (-)
G1841803 NA non-coding downstream 213523 21084851 ~ 21085071 (-)
G1841793 NA non-coding downstream 225582 21072806 ~ 21073012 (-)
G1841964 NA non-coding upstream 50250 21354681 ~ 21382261 (-)
G1842008 NA non-coding upstream 123031 21427462 ~ 21427887 (-)
G1842039 NA non-coding upstream 156525 21460956 ~ 21462159 (-)
G1842145 NA non-coding upstream 343815 21648246 ~ 21651632 (-)
G1842169 NA non-coding upstream 381650 21686081 ~ 21686343 (-)
G1841694 NA other downstream 354979 20943307 ~ 20943615 (-)
LOC110502408 LOC106606370 other downstream 1913552 19261070 ~ 19385465 (-)
si:dkey-51a16.9 LOC106576688 other downstream 2177251 19111958 ~ 19145332 (-)
LOC110502394 LOC106606249 other downstream 2444422 18849389 ~ 18854222 (-)
LOC110502361 LOC106605890 other downstream 3568082 17725263 ~ 17781515 (-)
G1841959 NA other upstream 41083 21345514 ~ 21371799 (-)
G1843946 NA other upstream 1878556 23182987 ~ 23233423 (-)
LOC110502461 LOC106607165 other upstream 1911054 23213905 ~ 23218749 (-)
LOC110502462 LOC106607169 other upstream 2040660 23344353 ~ 23358461 (-)
G1846858 NA other upstream 4135376 25439807 ~ 25440387 (-)

Expression


Co-expression Network